Detailed information    

insolico Bioinformatically predicted

Overview


Name   recA   Type   Machinery gene
Locus tag   SMUNN2025_RS09390 Genome accession   NC_013928
Coordinates   1932375..1933526 (-) Length   383 a.a.
NCBI ID   WP_002262392.1    Uniprot ID   P27624
Organism   Streptococcus mutans NN2025     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1927375..1938526
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUNN2025_RS09355 (SmuNN2025_1817) - 1928758..1929057 (-) 300 WP_002277471.1 DUF1292 domain-containing protein -
  SMUNN2025_RS09360 (SmuNN2025_1818) ruvX 1929138..1929557 (-) 420 WP_002277470.1 Holliday junction resolvase RuvX -
  SMUNN2025_RS09365 (SmuNN2025_1819) - 1929554..1929823 (-) 270 WP_002262386.1 IreB family regulatory phosphoprotein -
  SMUNN2025_RS09370 (SmuNN2025_1820) brsR 1929991..1930425 (+) 435 WP_012997971.1 bacteriocin genes transcriptional regulator BrsR Regulator
  SMUNN2025_RS09375 (SmuNN2025_1821) brsM 1930438..1930884 (+) 447 WP_002262388.1 bacteriocin genes regulator BrsM Regulator
  SMUNN2025_RS10230 - 1930875..1931075 (-) 201 Protein_1816 hypothetical protein -
  SMUNN2025_RS09380 (SmuNN2025_1822) - 1931216..1931641 (-) 426 WP_002266116.1 hypothetical protein -
  SMUNN2025_RS09385 (SmuNN2025_1823) spx 1931892..1932290 (-) 399 WP_002262391.1 transcriptional regulator Spx -
  SMUNN2025_RS09390 (SmuNN2025_1824) recA 1932375..1933526 (-) 1152 WP_002262392.1 recombinase RecA Machinery gene
  SMUNN2025_RS09395 (SmuNN2025_1825) cinA 1933566..1934822 (-) 1257 WP_002277468.1 competence/damage-inducible protein A Machinery gene
  SMUNN2025_RS09400 (SmuNN2025_1826) - 1934971..1935531 (-) 561 WP_002283270.1 DNA-3-methyladenine glycosylase I -
  SMUNN2025_RS09405 (SmuNN2025_1827) ruvA 1935613..1936206 (-) 594 WP_002266975.1 Holliday junction branch migration protein RuvA -
  SMUNN2025_RS09410 (SmuNN2025_1828) mutL 1936391..1938346 (-) 1956 WP_002287711.1 DNA mismatch repair endonuclease MutL -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 41420.01 Da        Isoelectric Point: 4.9881

>NTDB_id=36621 SMUNN2025_RS09390 WP_002262392.1 1932375..1933526(-) (recA) [Streptococcus mutans NN2025]
MAKRIKKTEEITKKFGDERKKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIVEIYGP
ESSGKTTVALHAVAQAQKDGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGIMFGNPETTPGGRALKFYSSVRLDVRG
NTQIKGTGEQKDSNIGKETKIKVVKNKVAPPFKEAFVEIIYGEGISRTGELVKIASDLGIIQKAGAWYSYNGEKIGQGSE
NAKKFLADNPEIFDDIDHKVRVQYGLIEEDNTEEKQSSKEKETDEKADKNLVLELDDTIELED

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=36621 SMUNN2025_RS09390 WP_002262392.1 1932375..1933526(-) (recA) [Streptococcus mutans NN2025]
TTGGCCAAAAGAATAAAAAAGACAGAAGAAATAACGAAAAAATTTGGTGATGAGCGTAAGAAAGCTCTTGATGATGCTTT
GAAAAACATCGAAAAAGATTTTGGTAAAGGTGCAGTTATGCGTCTGGGTGAACGCGCTGAACAAAAGGTTCAGGTGATGA
GTTCAGGAAGTCTGGCTCTTGATATTGCTCTTGGGGCAGGCGGTTATCCAAAAGGGCGTATCGTTGAGATTTACGGGCCA
GAATCTTCTGGTAAGACAACTGTCGCTCTTCATGCTGTTGCTCAGGCGCAAAAAGATGGCGGTATTGCCGCTTTCATTGA
TGCAGAACATGCCCTTGATCCAGCCTATGCTGCTGCTCTTGGCGTTAATATTGATGAGCTTTTGCTTTCACAACCAGATT
CAGGAGAACAGGGTCTTGAAATTGCAGGGAAATTGATTGATTCTGGCGCTGTTGATTTAGTTGTTGTTGACTCAGTGGCA
GCTTTAGTACCACGTGCGGAGATTGACGGAGATATTGGTGATAGTCATGTTGGCTTACAAGCACGCATGATGAGTCAAGC
GATGCGTAAATTATCAGCTTCAATCAATAAAACAAAAACCATTGCCATTTTTATTAATCAATTGCGGGAAAAAGTTGGTA
TTATGTTTGGTAATCCAGAAACAACCCCTGGCGGGCGTGCCTTGAAGTTTTATTCTTCTGTGCGTCTTGATGTCCGTGGC
AATACTCAAATTAAAGGAACCGGGGAACAAAAAGACAGCAATATTGGTAAAGAGACCAAAATTAAAGTTGTTAAAAATAA
AGTTGCTCCACCATTTAAGGAAGCTTTTGTAGAAATTATATATGGTGAAGGCATTTCTCGTACAGGTGAATTAGTTAAGA
TTGCCAGTGATTTGGGAATTATCCAAAAAGCTGGAGCTTGGTACTCTTATAATGGTGAAAAAATTGGGCAAGGTTCTGAA
AATGCTAAAAAATTCCTAGCTGATAATCCAGAAATTTTTGATGACATCGATCATAAAGTGCGTGTTCAATATGGTTTAAT
TGAGGAAGATAATACTGAAGAAAAACAGTCTTCTAAAGAAAAGGAAACTGATGAGAAAGCTGACAAAAACCTTGTTTTAG
AGCTGGATGATACAATTGAGCTTGAAGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB P27624

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Streptococcus mutans UA159

100

100

1

  recA Streptococcus pyogenes NZ131

87.206

100

0.872

  recA Streptococcus pneumoniae D39

83.204

100

0.841

  recA Streptococcus pneumoniae Rx1

83.204

100

0.841

  recA Streptococcus pneumoniae R6

83.204

100

0.841

  recA Streptococcus pneumoniae TIGR4

83.204

100

0.841

  recA Streptococcus mitis NCTC 12261

84.293

99.739

0.841

  recA Streptococcus mitis SK321

83.77

99.739

0.836

  recA Lactococcus lactis subsp. cremoris KW2

76.657

90.601

0.695

  recA Latilactobacillus sakei subsp. sakei 23K

68.208

90.339

0.616

  recA Bacillus subtilis subsp. subtilis str. 168

68.389

85.901

0.587

  recA Neisseria gonorrhoeae MS11

60.684

91.645

0.556

  recA Neisseria gonorrhoeae MS11

60.684

91.645

0.556

  recA Neisseria gonorrhoeae strain FA1090

60.684

91.645

0.556

  recA Acinetobacter baylyi ADP1

59.375

91.906

0.546

  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

60.411

89.034

0.538

  recA Glaesserella parasuis strain SC1401

60.294

88.773

0.535

  recA Acinetobacter baumannii D1279779

61.585

85.64

0.527

  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

61.92

84.334

0.522

  recA Vibrio cholerae O1 biovar El Tor strain E7946

61.231

84.856

0.52

  recA Vibrio cholerae strain A1552

61.231

84.856

0.52

  recA Pseudomonas stutzeri DSM 10701

57.864

87.99

0.509

  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

57.704

86.423

0.499

  recA Ralstonia pseudosolanacearum GMI1000

59.621

82.768

0.493

  recA Helicobacter pylori 26695

56.287

87.206

0.491

  recA Helicobacter pylori strain NCTC11637

56.287

87.206

0.491


Multiple sequence alignment