Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   SAPIG_RS02205 Genome accession   NC_017333
Coordinates   458361..459206 (+) Length   281 a.a.
NCBI ID   WP_001825659.1    Uniprot ID   -
Organism   Staphylococcus aureus subsp. aureus ST398     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 453361..464206
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAPIG_RS02190 (SAPIG0437) - 453627..455468 (-) 1842 WP_000077324.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -
  SAPIG_RS02195 (SAPIG0438) metC 455437..456597 (-) 1161 WP_000175863.1 cystathionine beta-lyase MetC -
  SAPIG_RS02200 (SAPIG0439) - 456594..457697 (-) 1104 WP_000655690.1 PLP-dependent transferase -
  SAPIG_RS02205 (SAPIG0440) spo0J 458361..459206 (+) 846 WP_001825659.1 ParB/RepB/Spo0J family partition protein Regulator
  SAPIG_RS02210 (SAPIG0441) - 459360..460241 (+) 882 WP_000373073.1 mechanosensitive ion channel family protein -
  SAPIG_RS02215 (SAPIG0442) - 460271..460474 (+) 204 WP_000157348.1 DUF951 domain-containing protein -
  SAPIG_RS02220 (SAPIG0443) ychF 460486..461583 (+) 1098 WP_001218731.1 redox-regulated ATPase YchF -
  SAPIG_RS02225 (SAPIG0444) - 461669..461860 (-) 192 WP_001052481.1 hypothetical protein -
  SAPIG_RS02230 (SAPIG0445) rpsF 462104..462400 (+) 297 WP_001261460.1 30S ribosomal protein S6 -
  SAPIG_RS02235 (SAPIG0446) ssbA 462421..462924 (+) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  SAPIG_RS02240 (SAPIG0447) rpsR 462976..463218 (+) 243 WP_000897044.1 30S ribosomal protein S18 -
  SAPIG_RS16045 - 463455..463682 (-) 228 Protein_446 Abi family protein -
  SAPIG_RS15850 - 463675..463951 (-) 277 Protein_447 site-specific integrase -

Sequence


Protein


Download         Length: 281 a.a.        Molecular weight: 32797.86 Da        Isoelectric Point: 10.0554

>NTDB_id=36615 SAPIG_RS02205 WP_001825659.1 458361..459206(+) (spo0J) [Staphylococcus aureus subsp. aureus ST398]
MSELSKSEDQRITKTKDEQIKKIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGAKVDISIKKSVGKISFEFESQDDFVRIIEQLNRKYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=36615 SAPIG_RS02205 WP_001825659.1 458361..459206(+) (spo0J) [Staphylococcus aureus subsp. aureus ST398]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGAAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGTATTTTGCAACCAATTGTGCTAAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTACCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTTAGATATTTAGAAAACCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAGGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGCGCAAAAGTAGATATATCGATAAAAAAATCAGTCGGCAAAATCTCATTTGAGTTTGAATCACAAGATGA
CTTTGTGAGAATCATTGAACAATTAAATCGTAAGTATGGTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

40.996

92.883

0.381


Multiple sequence alignment