Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   SMUNN2025_RS07930 Genome accession   NC_013928
Coordinates   1633247..1634281 (-) Length   344 a.a.
NCBI ID   WP_002267541.1    Uniprot ID   -
Organism   Streptococcus mutans NN2025     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1628247..1639281
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUNN2025_RS10795 - 1629044..1629139 (-) 96 Protein_1535 translation initiation factor IF-2 N-terminal domain-containing protein -
  SMUNN2025_RS07895 (SmuNN2025_1540) - 1629160..1629462 (-) 303 WP_002262601.1 YlxQ-related RNA-binding protein -
  SMUNN2025_RS07900 (SmuNN2025_1541) rnpM 1629455..1629751 (-) 297 WP_002263922.1 RNase P modulator RnpM -
  SMUNN2025_RS07905 (SmuNN2025_1542) nusA 1629769..1630962 (-) 1194 WP_002262603.1 transcription termination factor NusA -
  SMUNN2025_RS07910 (SmuNN2025_1543) rimP 1630998..1631489 (-) 492 WP_002267543.1 ribosome maturation factor RimP -
  SMUNN2025_RS07920 (SmuNN2025_1544) trmB 1631761..1632396 (-) 636 WP_002292541.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SMUNN2025_RS07925 (SmuNN2025_1545) ccrZ 1632406..1633188 (-) 783 WP_002262606.1 cell cycle regulator CcrZ -
  SMUNN2025_RS07930 (SmuNN2025_1546) pptB 1633247..1634281 (-) 1035 WP_002267541.1 ABC transporter permease Regulator
  SMUNN2025_RS07935 (SmuNN2025_1547) pptA 1634284..1635009 (-) 726 WP_002262608.1 ABC transporter ATP-binding protein Regulator
  SMUNN2025_RS07940 (SmuNN2025_1548) - 1635074..1635493 (+) 420 WP_002262609.1 HIT family protein -
  SMUNN2025_RS07945 (SmuNN2025_1549) - 1635490..1635783 (+) 294 WP_002268777.1 hypothetical protein -
  SMUNN2025_RS07950 (SmuNN2025_1550) brpA 1635946..1637166 (-) 1221 WP_002262611.1 biofilm formation/cell division transcriptional regulator BrpA -
  SMUNN2025_RS07955 (SmuNN2025_1551) tsaE 1637497..1637940 (-) 444 WP_002283346.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40598.06 Da        Isoelectric Point: 10.6270

>NTDB_id=36609 SMUNN2025_RS07930 WP_002267541.1 1633247..1634281(-) (pptB) [Streptococcus mutans NN2025]
MKAIFTKRRFHFINQCSRYLRYVFNDHFVLVLIFLLGFLMVQYSQLLKHFPANHWPIMLVLVLVVLTLLFWGNIATYLEP
ADQQFLLVREKDIVALIQKAKRRALFFWGTWQTLLLLILAPLFLRLGLALFSFLFLLLFLLFLKGLIIEKKSRAFLKQKG
LNWDHALNQEKKRQQAILKFFSLFTNVKGISNSVKRRAYLDFGTKLLPKETHKAWTNLYLRAFLRSGDYLGLTFRLGFLS
LLSLLFIDNPLMSAGLALLFNYLLLFQLLALYKHYDYQYLTALFPISKAEKKANLKQLLRVILYFLTAVEFCFSFSWQKT
IILLLAMLCLNEVYLPYKIKKMID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=36609 SMUNN2025_RS07930 WP_002267541.1 1633247..1634281(-) (pptB) [Streptococcus mutans NN2025]
ATGAAGGCAATTTTTACAAAAAGACGATTCCATTTTATCAATCAATGCAGTCGATACCTTCGCTATGTTTTTAATGATCA
TTTTGTTTTAGTATTGATTTTTTTACTAGGTTTTCTTATGGTACAGTATAGTCAGCTGTTAAAACATTTTCCGGCTAATC
ATTGGCCTATCATGCTTGTTTTAGTGTTAGTTGTCTTGACCTTACTATTTTGGGGAAATATAGCGACTTATTTGGAACCA
GCGGATCAGCAATTTCTTTTGGTCAGGGAAAAGGACATTGTTGCTTTAATCCAAAAAGCTAAAAGACGAGCTCTTTTCTT
TTGGGGAACTTGGCAGACACTCTTGCTTCTTATTTTGGCACCTCTTTTTTTACGTTTGGGACTGGCACTTTTTTCTTTTC
TTTTTTTGCTCCTTTTTTTGCTCTTTTTAAAAGGATTGATCATTGAAAAAAAAAGCAGAGCTTTTTTGAAGCAGAAAGGA
CTGAACTGGGATCATGCTCTTAATCAAGAGAAAAAGCGGCAGCAGGCAATTTTAAAATTCTTTTCACTTTTTACCAATGT
TAAAGGAATTTCAAACAGCGTTAAGCGACGGGCTTATTTGGATTTTGGGACAAAATTATTGCCGAAGGAGACTCATAAAG
CGTGGACTAATCTTTATTTAAGAGCTTTTTTACGCAGTGGCGATTATTTAGGACTGACCTTTCGTTTAGGTTTTTTAAGT
CTTTTAAGTCTTCTTTTTATTGATAATCCTTTAATGTCAGCAGGTTTAGCGCTCCTTTTTAATTACCTCTTGCTTTTTCA
ATTGTTGGCTCTTTATAAACATTATGATTATCAATATTTAACAGCCCTTTTTCCCATTTCAAAAGCGGAGAAGAAGGCTA
ATTTGAAACAGTTATTGCGTGTTATTCTATATTTTCTAACAGCTGTTGAATTTTGTTTTAGCTTTTCATGGCAAAAGACA
ATTATTTTACTTTTGGCAATGCTTTGTCTCAATGAAGTTTATCTGCCTTACAAAATAAAGAAGATGATTGACTAA

Domains

Predicted by InterproScan.

Bacterial ABC transporter protein EcsB (EcsB)

(3-155)

Bacterial ABC transporter protein EcsB (EcsB)

(157-328)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus salivarius strain HSISS4

51.453

100

0.515
  pptB Streptococcus thermophilus LMD-9

50.872

100

0.509

Multiple sequence alignment