Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   LROSRS0_RS06985 Genome accession   NZ_CP040576
Coordinates   1535917..1537182 (-) Length   421 a.a.
NCBI ID   WP_017261985.1    Uniprot ID   A0A0R1RLJ3
Organism   Furfurilactobacillus rossiae strain RS     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1530917..1542182
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LROSRS0_RS06980 (LROSRS0_1369) - 1534157..1535866 (-) 1710 WP_017261984.1 proline--tRNA ligase -
  LROSRS0_RS06985 (LROSRS0_1370) eeP 1535917..1537182 (-) 1266 WP_017261985.1 RIP metalloprotease RseP Regulator
  LROSRS0_RS06990 (LROSRS0_1371) - 1537277..1538062 (-) 786 WP_017261986.1 phosphatidate cytidylyltransferase -
  LROSRS0_RS06995 (LROSRS0_1372) - 1538108..1538803 (-) 696 WP_236402217.1 isoprenyl transferase -
  LROSRS0_RS07000 (LROSRS0_1373) frr 1539224..1539787 (-) 564 WP_017261988.1 ribosome recycling factor -
  LROSRS0_RS07005 (LROSRS0_1374) pyrH 1539789..1540511 (-) 723 WP_017261989.1 UMP kinase -
  LROSRS0_RS07010 (LROSRS0_1375) tsf 1540594..1541469 (-) 876 WP_017261990.1 translation elongation factor Ts -

Sequence


Protein


Download         Length: 421 a.a.        Molecular weight: 45679.00 Da        Isoelectric Point: 9.8470

>NTDB_id=365421 LROSRS0_RS06985 WP_017261985.1 1535917..1537182(-) (eeP) [Furfurilactobacillus rossiae strain RS]
MVKTIVAFIIVFGILVVVHEFGHFYFAKRSGILVREFSIGMGPKVFWTRKNGTLYTIRILPLGGYVRMAGAAEDEDDQLQ
PGTPISVMVGDSGKVTRINASDQTTLFNGIPVIVTESDLVDQLVIKGYENGDESVVKTYAVDHDATIIEKDGTEVLIAPR
DVQFQSATLWHRILTNFAGPLNNFILAWLVFAIMGFAMGGVASNSNAISGVLTNTPAKSAGLKSGDRIVSVNDKRTNSWT
AVTSAITSDTHGDITLGIKRGQKTVKHVKITPQVKTVSGSKTRTVGIKRGIDTGFFAKLFGGFWNTTVLLFAALGHLFTH
FSLNDLGGPVAIYANTATATQAGWSGILYWLGFLSLNLGIVNLLPIPALDGGKLVLNVIEAIRRKPLSQQTEGVVTIIGF
GFVLFLMILVTWNDIMRYFVH

Nucleotide


Download         Length: 1266 bp        

>NTDB_id=365421 LROSRS0_RS06985 WP_017261985.1 1535917..1537182(-) (eeP) [Furfurilactobacillus rossiae strain RS]
ATGGTAAAAACAATTGTTGCTTTTATTATTGTTTTTGGAATTTTAGTGGTCGTGCATGAGTTTGGCCACTTTTATTTTGC
CAAACGGTCAGGTATTCTTGTGCGTGAATTTTCAATCGGAATGGGTCCCAAAGTTTTTTGGACGCGCAAAAACGGGACGT
TGTATACGATTCGAATTTTGCCCTTAGGGGGTTATGTTCGAATGGCCGGTGCTGCCGAGGATGAGGATGACCAACTTCAA
CCGGGAACGCCAATCAGTGTTATGGTGGGCGATTCTGGTAAAGTCACCAGAATTAATGCTAGTGATCAAACGACGCTGTT
TAATGGCATTCCTGTTATTGTGACGGAGTCTGACTTAGTAGATCAATTGGTCATAAAGGGTTACGAAAATGGTGACGAAA
GTGTCGTCAAGACGTATGCAGTAGATCACGATGCAACAATCATTGAAAAGGACGGCACAGAGGTGTTGATTGCGCCACGT
GATGTCCAGTTTCAGTCGGCTACGTTGTGGCACCGTATTTTAACTAACTTTGCAGGACCACTGAATAACTTTATTCTGGC
GTGGTTGGTGTTTGCCATTATGGGATTCGCCATGGGTGGCGTTGCCAGTAATAGCAACGCGATTTCAGGAGTATTAACGA
ATACGCCGGCGAAATCGGCTGGCCTGAAATCGGGTGACCGAATCGTTAGCGTTAATGACAAACGCACTAACAGCTGGACG
GCTGTGACAAGTGCTATTACTAGTGATACCCATGGCGACATTACACTTGGCATTAAGCGTGGTCAAAAGACGGTTAAACA
TGTCAAAATAACGCCGCAGGTAAAAACTGTTTCTGGCAGTAAAACGCGGACCGTTGGCATTAAACGTGGTATCGATACCG
GCTTTTTTGCAAAGCTATTTGGTGGGTTCTGGAACACGACTGTGCTGTTGTTCGCGGCGCTCGGTCATTTGTTCACGCAT
TTCAGTCTTAATGACCTTGGTGGGCCTGTGGCGATTTATGCGAATACGGCCACAGCTACACAGGCTGGTTGGAGTGGTAT
CCTCTACTGGCTAGGTTTTTTATCATTAAATTTAGGAATCGTCAACTTGTTGCCAATTCCTGCGCTTGACGGTGGTAAAC
TAGTTTTAAACGTAATTGAAGCAATTCGACGTAAACCATTGTCACAGCAAACTGAAGGTGTCGTTACAATCATCGGATTT
GGTTTTGTTTTGTTTCTGATGATTCTGGTCACGTGGAACGATATCATGCGCTATTTTGTTCACTGA

Domains


Predicted by InterproScan.

(208-265)

(7-406)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0R1RLJ3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

49.649

100

0.504

  eeP Streptococcus thermophilus LMG 18311

49.649

100

0.504


Multiple sequence alignment