Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   E3S80_RS05800 Genome accession   NZ_CP047847
Coordinates   1119077..1119796 (-) Length   239 a.a.
NCBI ID   WP_001217723.1    Uniprot ID   -
Organism   Staphylococcus aureus strain UP_522     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1114077..1124796
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3S80_RS05780 (E3S80_05780) - 1114460..1114825 (+) 366 WP_000214070.1 truncated hemoglobin YjbI -
  E3S80_RS05785 (E3S80_05785) yjbH 1114848..1115654 (+) 807 WP_000896697.1 protease adaptor protein YjbH -
  E3S80_RS05790 (E3S80_05790) pepF 1116114..1117922 (-) 1809 WP_000082725.1 oligoendopeptidase F Regulator
  E3S80_RS05795 (E3S80_05795) coiA 1117970..1118956 (-) 987 WP_000959292.1 competence protein CoiA Machinery gene
  E3S80_RS05800 (E3S80_05800) mecA 1119077..1119796 (-) 720 WP_001217723.1 adaptor protein MecA Regulator
  E3S80_RS05805 (E3S80_05805) spxA 1120167..1120562 (-) 396 WP_000258003.1 transcriptional regulator SpxA -
  E3S80_RS05810 (E3S80_05810) trpS 1120857..1121846 (+) 990 WP_031837887.1 tryptophan--tRNA ligase -
  E3S80_RS05815 (E3S80_05815) opp4C 1121888..1122769 (-) 882 WP_047928210.1 oligopeptide ABC transporter permease -
  E3S80_RS05820 (E3S80_05820) opp4B 1122781..1123743 (-) 963 WP_000239820.1 oligopeptide ABC transporter permease -
  E3S80_RS05825 (E3S80_05825) - 1123736..1124671 (-) 936 WP_235428454.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 239 a.a.        Molecular weight: 28285.17 Da        Isoelectric Point: 4.1548

>NTDB_id=365247 E3S80_RS05800 WP_001217723.1 1119077..1119796(-) (mecA) [Staphylococcus aureus strain UP_522]
MRIERVDDTTVKLFITYSDIEARGFSREDLWTNRKRGEEFFWSMMDEINEEEDFVVEGPLWIQVHAFEKGVEVTISKSKN
EDMMNMSDDDATDQFDEQVQELLAQTLEGEDQLEELFDQRTKEKEAQGSKRQKSSARKNTRTIIVKFNDLEDVINYAYHS
NPITTEFEDLLYMVDGTYYYAVHFDSHVDQEVINDSYSQLLEFAYPTDRTEVYLNDYAKIIMSHNVTAQVRRYFPETTE

Nucleotide


Download         Length: 720 bp        

>NTDB_id=365247 E3S80_RS05800 WP_001217723.1 1119077..1119796(-) (mecA) [Staphylococcus aureus strain UP_522]
ATGAGAATAGAACGAGTAGATGATACAACTGTAAAATTGTTTATAACATATAGCGATATCGAGGCCCGTGGATTTAGTCG
TGAAGATTTATGGACAAATCGCAAACGTGGCGAAGAATTCTTTTGGTCAATGATGGATGAAATTAACGAAGAAGAAGATT
TTGTTGTAGAAGGTCCATTATGGATTCAAGTACATGCCTTTGAAAAAGGTGTCGAAGTCACAATTTCTAAATCTAAAAAT
GAAGATATGATGAATATGTCTGATGATGATGCAACTGATCAATTTGATGAACAAGTTCAAGAATTGTTAGCTCAAACATT
AGAAGGTGAAGATCAATTAGAAGAATTATTCGATCAACGAACAAAAGAAAAAGAAGCTCAAGGTTCTAAACGTCAAAAGT
CTTCAGCACGTAAAAATACAAGAACAATTATTGTGAAATTTAACGATTTAGAAGATGTTATTAATTATGCATATCATAGC
AATCCAATAACTACAGAGTTTGAAGATTTGTTATATATGGTTGATGGTACTTATTATTATGCTGTACATTTTGATAGTCA
TGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCAACAGACAGAACAGAAGTTTATT
TAAATGACTATGCTAAAATAATTATGAGTCATAACGTAACAGCTCAAGTTCGACGTTATTTTCCAGAGACAACTGAATAA

Domains

Predicted by InterProScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-229)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

37.975

99.163

0.377

Multiple sequence alignment