Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   FC605_RS16125 Genome accession   NZ_CP040528
Coordinates   3104076..3106337 (-) Length   753 a.a.
NCBI ID   WP_080529736.1    Uniprot ID   -
Organism   Bacillus subtilis strain PR10     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3099076..3111337
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FC605_RS16085 (FC605_16085) mrpB 3099543..3099974 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  FC605_RS16090 (FC605_16090) mrpC 3099974..3100315 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  FC605_RS16095 (FC605_16095) mrpD 3100308..3101789 (+) 1482 WP_080529734.1 Na+/H+ antiporter subunit D -
  FC605_RS16100 (FC605_16100) mrpE 3101795..3102271 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  FC605_RS16105 (FC605_16105) mrpF 3102271..3102555 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  FC605_RS16110 (FC605_16110) mnhG 3102539..3102913 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  FC605_RS16115 (FC605_16115) yuxO 3102952..3103332 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  FC605_RS16120 (FC605_16120) comA 3103351..3103995 (-) 645 WP_080529735.1 two-component system response regulator ComA Regulator
  FC605_RS16125 (FC605_16125) comP 3104076..3106337 (-) 2262 WP_080529736.1 histidine kinase Regulator
  FC605_RS16130 (FC605_16130) comX 3106353..3106574 (-) 222 WP_014480704.1 competence pheromone ComX -
  FC605_RS16135 (FC605_16135) - 3106576..3107439 (-) 864 WP_080529737.1 polyprenyl synthetase family protein -
  FC605_RS16140 (FC605_16140) degQ 3107624..3107764 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  FC605_RS16145 (FC605_16145) - 3107986..3108111 (+) 126 WP_003228793.1 hypothetical protein -
  FC605_RS16150 (FC605_16150) - 3108226..3108594 (+) 369 WP_014477834.1 hypothetical protein -
  FC605_RS16155 (FC605_16155) pdeH 3108570..3109799 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 753 a.a.        Molecular weight: 87834.60 Da        Isoelectric Point: 8.1649

>NTDB_id=365040 FC605_RS16125 WP_080529736.1 3104076..3106337(-) (comP) [Bacillus subtilis strain PR10]
MYRYINVYKYLSLVFIILSFIYVIYLSYSFAFNIFVGADVKINEQGKLEVTNVLDYTDEYYSGVKKGDIILEVNGEKGSD
IQLKSGRLVNVESLIVERDNKSFHLQNVSLISEENLFMYLIPVISYSICLFCIFFIYRINKVRKSTSAYILILFLLFVSV
AYVSACGARRGEEISTYLLVLTLVSCPVLYIHFIYKYFIELGTKLFEKKILIIMYMLPLINLLLEDVLSNRLKSSAFLSN
LNLISFFVLVLTVSILIHKGIRKFKQKEQKSILKVLAYTNIFSFSPFIVFFAVPYVFFEKYVSPFSLAAFTLVIPFSLVY
QFMTNRLYNIDFVVGRLKYYGFLAITPTIIVVTIFNYIQQPKDIFYLVKLTIAIYVLMFAVFYFKEIIDFRFKLKRFTEK
FNYQDGIFKFTQLIKQASSVDQVLNHFKNTILEVLNIDNACVYDNSKGEITLLSKNNFKDLTYKNHEQYVKNFSGDIGKI
KEFKQGFIIKIGERGDRSFLVLCFSSYNTFKLTRDEIAWLQTLAFYTNVSLENVMKIEELMVHLEDLKQQESNPVWLKKL
MYTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQQQE
RVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDGVGFDQEKNTEHSMSMG
LSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2262 bp        

>NTDB_id=365040 FC605_RS16125 WP_080529736.1 3104076..3106337(-) (comP) [Bacillus subtilis strain PR10]
ATGTACAGATATATTAACGTCTATAAATATTTGTCTCTAGTTTTTATCATTTTAAGTTTTATTTATGTTATATACCTCTC
GTATAGCTTTGCTTTTAACATCTTCGTAGGTGCGGATGTAAAGATAAATGAACAGGGTAAGTTAGAGGTCACCAATGTTT
TAGATTATACAGATGAATATTATTCAGGTGTGAAAAAGGGAGATATCATTCTTGAAGTAAATGGGGAGAAAGGCAGTGAT
ATTCAATTAAAAAGTGGAAGATTGGTCAATGTAGAAAGTTTAATTGTTGAGAGAGATAATAAATCATTTCATTTACAAAA
TGTAAGCCTAATCAGTGAAGAAAATTTATTTATGTATCTCATTCCTGTAATATCTTATTCAATCTGTTTATTTTGTATAT
TTTTTATTTATAGAATAAATAAAGTAAGAAAATCAACTTCTGCTTATATTTTAATTTTATTTTTGTTATTTGTATCAGTA
GCGTATGTAAGTGCATGTGGAGCAAGAAGAGGTGAAGAGATAAGCACTTATCTGCTTGTTCTTACTTTAGTCAGTTGTCC
GGTGTTATATATTCATTTTATATATAAATACTTTATAGAATTAGGAACAAAGTTATTCGAAAAGAAGATTTTAATCATTA
TGTATATGCTCCCGCTAATAAATCTTTTATTAGAGGACGTTCTGAGTAATAGATTAAAATCTTCGGCTTTTTTGTCTAAT
CTGAATTTGATTTCATTTTTTGTCCTAGTTCTTACTGTATCGATTCTTATCCATAAAGGGATAAGAAAATTTAAACAAAA
AGAGCAAAAGTCAATTTTGAAAGTCCTTGCTTATACAAATATCTTTTCTTTCAGTCCGTTTATTGTCTTTTTTGCTGTTC
CATATGTGTTTTTCGAGAAGTATGTCTCACCTTTTAGTTTGGCTGCTTTTACACTTGTTATACCTTTTTCTTTAGTATAT
CAATTTATGACTAATAGACTTTATAATATCGACTTTGTTGTGGGGCGGCTTAAGTACTACGGTTTTTTAGCCATTACACC
TACTATTATCGTAGTGACCATCTTTAATTACATTCAGCAACCAAAGGATATCTTTTATTTAGTTAAACTAACAATTGCAA
TATATGTTCTTATGTTTGCCGTTTTTTACTTTAAAGAAATCATTGATTTTCGTTTCAAGTTGAAAAGATTTACAGAGAAA
TTTAATTATCAAGATGGGATTTTTAAATTTACTCAGTTGATTAAGCAAGCATCATCAGTAGATCAAGTACTTAATCACTT
TAAAAATACAATCCTAGAAGTATTAAACATAGATAATGCTTGCGTGTATGATAATTCTAAAGGGGAAATCACCCTTCTTA
GTAAGAACAACTTTAAAGATCTGACTTATAAAAATCATGAGCAATATGTGAAAAATTTTTCTGGTGATATCGGTAAAATT
AAAGAGTTTAAACAAGGTTTTATTATTAAAATAGGTGAACGAGGAGACAGATCATTTTTAGTACTCTGTTTCTCAAGTTA
TAATACTTTTAAGTTAACAAGGGATGAAATTGCATGGCTTCAAACATTAGCATTTTATACAAATGTCTCATTGGAAAACG
TTATGAAAATCGAAGAATTGATGGTGCATCTTGAGGATTTAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTC
ATGTACACGATCGAGGAAAAACAACGCTCGGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTT
AAAACGCCAGTGTGAGCTGTTTTTGGGTGATTTCAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTG
TACAGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCAGCAGGAG
CGGGTTCCGTTTCATATTCGTTTAAATACCGGGAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCG
GATCATTCAAGAGTTTCTGTCTAATGCGGTCAAGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAA
ACAAAATCGTTCTTCATTATGAGGATGATGGCGTAGGGTTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGG
CTTTCTGGCATTAAGGAGAGAGTCAGGGCTTTAGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGC
TGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

53.966

100

0.551


Multiple sequence alignment