Detailed information NTG0036406

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: CJSA_RS05710
• Genome accession: NC_017279
• Coordinates: 1083861..1084820 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: Q0P9A8
• Organism: Campylobacter jejuni subsp. jejuni IA3902
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1078861..1089820

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CJSA_RS05685 (CJSA_1084)	neuC	1079426..1080541 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
CJSA_RS09420	-	1080538..1081452 (+)	915	Protein_1095	beta-1,4-N-acetylgalactosaminyltransferase	-
CJSA_RS09425	-	1081486..1082148 (+)	663	WP_002881429.1	N-acylneuraminate cytidylyltransferase	-
CJSA_RS05700 (CJSA_1086)	-	1082143..1082994 (-)	852	WP_014516804.1	glycosyltransferase	-
CJSA_RS05705 (CJSA_1087)	waaV	1082978..1083802 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
CJSA_RS05710 (CJSA_1088)	waaF	1083861..1084820 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
CJSA_RS05715 (CJSA_1089)	gmhA	1084801..1085361 (-)	561	WP_002858021.1	D-sedoheptulose 7-phosphate isomerase	-
CJSA_RS05720 (CJSA_1090)	rfaE1	1085358..1086743 (-)	1386	WP_014516805.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
CJSA_RS05725 (CJSA_1091)	rfaD	1086736..1087689 (-)	954	WP_002858041.1	ADP-glyceromanno-heptose 6-epimerase	-
CJSA_RS05730 (CJSA_1092)	gmhB	1087690..1088250 (-)	561	WP_002853963.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
CJSA_RS05735 (CJSA_1093)	-	1088332..1088634 (+)	303	WP_002852762.1	cytochrome c	-
CJSA_RS05740 (CJSA_1094)	ccoS	1088657..1088863 (-)	207	WP_002875422.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=36406 CJSA_RS05710 WP_002875425.1 1083861..1084820(+) (waaF) [Campylobacter jejuni subsp. jejuni IA3902]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=36406 CJSA_RS05710 WP_002875425.1 1083861..1084820(+) (waaF) [Campylobacter jejuni subsp. jejuni IA3902]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

3D structure

• AlphaFold DB: Q0P9A8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1