Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   FE254_RS02185 Genome accession   NZ_CP040349
Coordinates   483946..484353 (+) Length   135 a.a.
NCBI ID   WP_003458788.1    Uniprot ID   W6QSF7
Organism   Pseudomonas guguanensis strain HMFL31     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 478946..489353
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FE254_RS02155 (FE254_02185) - 479074..480081 (-) 1008 WP_129481948.1 aspartate carbamoyltransferase catalytic subunit -
  FE254_RS02160 (FE254_02190) pyrR 480093..480596 (-) 504 WP_017678428.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  FE254_RS02165 (FE254_02195) ruvX 480627..481064 (-) 438 WP_024306524.1 Holliday junction resolvase RuvX -
  FE254_RS02170 (FE254_02200) - 481061..481630 (-) 570 WP_273252474.1 YqgE/AlgH family protein -
  FE254_RS02175 (FE254_02205) - 481762..482658 (-) 897 WP_090430077.1 energy transducer TonB -
  FE254_RS02180 (FE254_02210) gshB 482747..483703 (-) 957 WP_273252473.1 glutathione synthase -
  FE254_RS02185 (FE254_02215) pilG 483946..484353 (+) 408 WP_003458788.1 twitching motility response regulator PilG Regulator
  FE254_RS02190 (FE254_02220) pilH 484401..484766 (+) 366 WP_004373130.1 twitching motility response regulator PilH -
  FE254_RS02195 (FE254_02225) - 484812..485348 (+) 537 WP_090430082.1 chemotaxis protein CheW -
  FE254_RS02200 (FE254_02230) - 485572..487608 (+) 2037 WP_090430407.1 methyl-accepting chemotaxis protein -
  FE254_RS02205 (FE254_02235) - 487669..488529 (+) 861 WP_090430410.1 protein-glutamate O-methyltransferase -

Sequence


Protein


Download         Length: 135 a.a.        Molecular weight: 14771.13 Da        Isoelectric Point: 6.7123

>NTDB_id=363541 FE254_RS02185 WP_003458788.1 483946..484353(+) (pilG) [Pseudomonas guguanensis strain HMFL31]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPSIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFTPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=363541 FE254_RS02185 WP_003458788.1 483946..484353(+) (pilG) [Pseudomonas guguanensis strain HMFL31]
ATGGAACAGCATTCCGAGGGTTTGAAAGTGATGGTGATCGACGACTCGAAAACGATTCGTCGCACCGCCGAAACTCTGCT
GAAAAAAGTGGGTTGTGACGTCATCACCGCGGTCGATGGCTTCGATGCCCTGGCCAAGATTGCCGACACTCACCCCAGCA
TCATCTTTGTCGACATCATGATGCCGCGTCTCGACGGGTATCAGACCTGTGCCCTGATCAAGAACAACAGTGCCTTCAAA
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGTCGTATCGTCGGCTCCGATCAATA
CCTGACCAAGCCCTTCAGTAAGGAAGAGCTGCTCGGTGCGATCAAAGCCCACGTGCCGGACTTCACCCCGGTGGAACAAG
CCTCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB W6QSF7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704

  vicR Streptococcus mutans UA159

42.857

93.333

0.4


Multiple sequence alignment