Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   SMI_RS09400 Genome accession   NC_013853
Coordinates   1925815..1927074 (-) Length   419 a.a.
NCBI ID   WP_000900678.1    Uniprot ID   D3HB43
Organism   Streptococcus mitis B6     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1920815..1932074
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMI_RS09390 (smi_1851) bglA 1922471..1923850 (-) 1380 WP_000943496.1 6-phospho-beta-glucosidase -
  SMI_RS09395 (smi_1852) - 1923949..1925802 (-) 1854 WP_000814057.1 proline--tRNA ligase -
  SMI_RS09400 (smi_1853) eeP 1925815..1927074 (-) 1260 WP_000900678.1 RIP metalloprotease RseP Regulator
  SMI_RS09405 (smi_1854) - 1927096..1927899 (-) 804 WP_000189852.1 phosphatidate cytidylyltransferase -
  SMI_RS09410 (smi_1855) - 1927908..1928666 (-) 759 WP_000466723.1 isoprenyl transferase -
  SMI_RS09415 (smi_1856) - 1928872..1930038 (+) 1167 WP_000163009.1 IS30-like element ISSmi1 family transposase -
  SMI_RS09420 (smi_1857) - 1930432..1931598 (+) 1167 WP_000160547.1 IS30-like element ISSmi3 family transposase -

Sequence

Protein


Download         Length: 419 a.a.        Molecular weight: 46002.67 Da        Isoelectric Point: 5.9938

>NTDB_id=36341 SMI_RS09400 WP_000900678.1 1925815..1927074(-) (eeP) [Streptococcus mitis B6]
MLGILTFILVFGIIVVVHEFGHFYFAKKSGILVREFAIGMGPKIFAHIGKDGTAYTIRILPLGGYVRMAGWGDDTTEIKT
GTPVSLTLTDDSKVKRINLSGKKLDQTALPMQVTQFDFEDKLFIRGLVLEEEKTFAVDHDATVVESDGTEVRIAPLDVQY
QNATIWGKLITNFAGPMNNFILGVVVFWILIFMQGGVRDVATNQFHVMPQGALAKVGVPETAQITKIGSHEINNWESLIQ
AVEAETKDKTAPTLDVTISEKGSDKQVTVTPEENQGRYLLGVQPGIKSDFLSMFVGGFTTAADSALRILSELKNLIFQPD
LNKLGGPVAIFKASSDAAKNGIENVLYFLAVISINIGIFNLIPIPALDGGKIVLNILEAIRRKPLKQEIETYVTLAGVVI
MVVLMIAVTWNDIMRLFFR

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=36341 SMI_RS09400 WP_000900678.1 1925815..1927074(-) (eeP) [Streptococcus mitis B6]
ATGCTCGGAATTTTAACCTTTATTCTGGTTTTTGGGATTATTGTAGTGGTGCACGAGTTCGGACACTTCTACTTTGCCAA
GAAATCAGGGATTCTAGTGCGTGAATTTGCCATTGGTATGGGACCCAAAATCTTTGCTCACATTGGCAAGGATGGGACGG
CCTATACCATTCGAATCTTGCCTCTGGGTGGCTATGTTCGCATGGCTGGTTGGGGTGATGATACAACTGAAATTAAGACA
GGAACTCCTGTCAGTTTGACCCTTACTGATGATAGTAAGGTTAAACGCATCAATCTTTCAGGTAAAAAATTAGATCAAAC
AGCCCTCCCTATGCAGGTGACCCAGTTTGATTTTGAAGACAAGCTCTTTATCAGAGGATTGGTTCTGGAAGAAGAAAAAA
CATTTGCAGTGGATCACGATGCAACGGTTGTGGAATCAGATGGTACTGAGGTTCGGATTGCACCTTTAGATGTTCAATAT
CAAAATGCGACTATCTGGGGAAAACTGATTACTAACTTTGCAGGTCCTATGAACAACTTTATCTTAGGTGTCGTTGTTTT
TTGGATTTTAATCTTTATGCAGGGGGGTGTCAGAGATGTAGCTACCAACCAGTTTCATGTCATGCCCCAAGGGGCTTTAG
CTAAGGTAGGAGTGCCAGAAACGGCTCAAATTACCAAGATTGGCTCACATGAGATTAACAACTGGGAAAGCTTGATTCAG
GCTGTAGAAGCAGAAACTAAAGATAAGACGGCCCCAACCTTGGATGTGACTATTTCTGAAAAGGGTAGTGACAAGCAAGT
CACTGTTACTCCAGAAGAAAATCAAGGTCGTTACCTTCTAGGTGTTCAACCGGGGATTAAGTCAGATTTTCTATCCATGT
TTGTAGGTGGTTTTACAACCGCTGCTGACTCGGCCCTCCGAATTCTCTCAGAACTGAAAAATCTGATTTTCCAACCGGAT
TTGAACAAACTAGGTGGACCTGTTGCCATCTTTAAGGCAAGTAGTGATGCTGCTAAAAATGGAATTGAAAATGTCTTGTA
CTTCTTGGCAGTGATTTCCATCAATATTGGGATTTTTAATCTTATTCCGATTCCAGCATTGGATGGTGGTAAGATTGTGC
TCAATATCCTGGAAGCCATCCGCCGTAAACCATTAAAACAAGAAATTGAAACCTATGTCACCTTGGCCGGAGTGGTCATC
ATGGTTGTCTTGATGATTGCTGTGACCTGGAATGACATCATGCGACTCTTTTTTAGATAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-404)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB D3HB43

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

63.333

100

0.635
  eeP Streptococcus thermophilus LMG 18311

63.095

100

0.632

Multiple sequence alignment