Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   EUC40_RS19980 Genome accession   NZ_CP040336
Coordinates   3938418..3938594 (-) Length   58 a.a.
NCBI ID   WP_001003337.1    Uniprot ID   A0A2A8PRE8
Organism   Bacillus luti strain FJ     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3933418..3943594
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EUC40_RS19960 - 3934192..3934938 (-) 747 WP_000966131.1 YjbA family protein -
  EUC40_RS19965 - 3935081..3935869 (-) 789 WP_156576363.1 DUF2268 domain-containing putative Zn-dependent protease -
  EUC40_RS19970 fabF 3935976..3937214 (-) 1239 WP_156576364.1 beta-ketoacyl-ACP synthase II -
  EUC40_RS19975 fabH 3937246..3938178 (-) 933 WP_001100546.1 beta-ketoacyl-ACP synthase III -
  EUC40_RS19980 comZ 3938418..3938594 (-) 177 WP_001003337.1 ComZ family protein Regulator
  EUC40_RS19985 - 3938649..3939521 (-) 873 WP_156576365.1 NAD(P)-dependent oxidoreductase -
  EUC40_RS19990 - 3939551..3940285 (-) 735 WP_071711080.1 alpha/beta hydrolase -
  EUC40_RS19995 - 3940442..3940624 (+) 183 WP_001211116.1 YjzD family protein -
  EUC40_RS20000 clpC 3940662..3943262 (-) 2601 WP_156576366.1 ATP-dependent chaperone ClpB Regulator

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6548.72 Da        Isoelectric Point: 4.6653

>NTDB_id=363363 EUC40_RS19980 WP_001003337.1 3938418..3938594(-) (comZ) [Bacillus luti strain FJ]
MNEKSMQFLQIAMKHLPEAKAILDSNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=363363 EUC40_RS19980 WP_001003337.1 3938418..3938594(-) (comZ) [Bacillus luti strain FJ]
ATGAACGAAAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCAATTTTAGATTCTAATGG
AATTGCGCTTGATATGGAGAAAGCACAACCAGTGTTAGAGTTATTGATGAAAGTAATGAACGAAGCATATGAGCTTGGGA
AAGCGGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2A8PRE8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment