Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   EUC40_RS19895 Genome accession   NZ_CP040336
Coordinates   3919376..3920059 (-) Length   227 a.a.
NCBI ID   WP_000402129.1    Uniprot ID   -
Organism   Bacillus luti strain FJ     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 3914376..3925059
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EUC40_RS19880 pepF 3914557..3916383 (-) 1827 WP_071711069.1 oligoendopeptidase F Regulator
  EUC40_RS19885 - 3916435..3917679 (-) 1245 WP_156576360.1 competence protein CoiA family protein -
  EUC40_RS19890 - 3917759..3919303 (-) 1545 WP_071711071.1 cardiolipin synthase -
  EUC40_RS19895 mecA 3919376..3920059 (-) 684 WP_000402129.1 adaptor protein MecA Regulator
  EUC40_RS19900 - 3920418..3921092 (+) 675 WP_156576361.1 TerC family protein -
  EUC40_RS19905 spx 3921142..3921537 (-) 396 WP_000258267.1 transcriptional regulator Spx -
  EUC40_RS19910 - 3922130..3922333 (+) 204 WP_071711073.1 hypothetical protein -
  EUC40_RS19915 - 3922363..3924009 (-) 1647 WP_071711074.1 peptide ABC transporter substrate-binding protein -

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 26980.03 Da        Isoelectric Point: 3.9856

>NTDB_id=363360 EUC40_RS19895 WP_000402129.1 3919376..3920059(-) (mecA) [Bacillus luti strain FJ]
MEIERINDHTMKFFITYVDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQTGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFEDRYYVYVEFDEVLHDEEEIDRILSIILEYGEESTLTIHRVGEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=363360 EUC40_RS19895 WP_000402129.1 3919376..3920059(-) (mecA) [Bacillus luti strain FJ]
TTGGAAATTGAAAGAATTAATGACCATACGATGAAATTTTTTATTACGTACGTTGATATAGAGGACAGAGGGTTTAATCG
TGAAGAAATTTGGTACGACCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGACCGCTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTAACGAAAGCAGAGCTG
TCAAAGGATGGACAAAAGCTGGAGCTGCCAATAGGGGTAGATAAAATTATAGACATTCCTCTAGATGAAGGGATCGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAGGAACAAACAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTTATTTCATTAAGCCACCGTCTTATCTTTGAGGATATAAAAGATGAGCTGTAT
TCGTTTGAGGACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAGGAAATTGATCGTATTCTAAG
TATTATTTTAGAATATGGAGAAGAATCTACTTTAACAATTCATCGTGTAGGTGAGTATGGGAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACAATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

56.14

100

0.564


Multiple sequence alignment