Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   EUC40_RS06200 Genome accession   NZ_CP040336
Coordinates   1188870..1189664 (+) Length   264 a.a.
NCBI ID   WP_033665531.1    Uniprot ID   A0A7V7SAB2
Organism   Bacillus luti strain FJ     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 1183870..1194664
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EUC40_RS06185 argR 1184708..1185157 (+) 450 WP_001032581.1 arginine repressor ArgR -
  EUC40_RS06190 recN 1185424..1187163 (+) 1740 WP_071713042.1 DNA repair protein RecN Machinery gene
  EUC40_RS06195 spoIVB 1187282..1188580 (+) 1299 WP_071713043.1 SpoIVB peptidase -
  EUC40_RS06200 spo0A 1188870..1189664 (+) 795 WP_033665531.1 sporulation transcription factor Spo0A Regulator
  EUC40_RS06205 - 1189958..1191490 (+) 1533 WP_156574105.1 glycosyltransferase family 39 protein -
  EUC40_RS06210 - 1191657..1191803 (-) 147 WP_001247671.1 YycC family protein -
  EUC40_RS06215 - 1191854..1192582 (+) 729 WP_156574107.1 glycerophosphodiester phosphodiesterase -
  EUC40_RS06220 - 1192634..1192867 (-) 234 WP_001190189.1 DUF2627 domain-containing protein -

Sequence


Protein


Download         Length: 264 a.a.        Molecular weight: 29496.24 Da        Isoelectric Point: 7.4720

>NTDB_id=363345 EUC40_RS06200 WP_033665531.1 1188870..1189664(+) (spo0A) [Bacillus luti strain FJ]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLKDRQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKVNATIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=363345 EUC40_RS06200 WP_033665531.1 1188870..1189664(+) (spo0A) [Bacillus luti strain FJ]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTTGCTGCTCAAGA
TGATATGGAAGTAATCGGAACTGCTTATAATGGACAAGAGTGTTTAAACTTATTGAAAGACAGGCAGCCAGATGTACTCG
TATTAGACATTATTATGCCACATCTAGATGGTTTAGCTGTATTAGAAAAAATGCGCCATATTGAAAGGCTAAGACAGCCT
AGCGTAATTATGTTAACAGCATTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGATTTAGGTGCTTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACAAGTCATATTCGTCAAGTGAGTGGTAAGGTAAACGCTACCATTAAACGTCCAT
TGCCATCTTTCCGATCAGCGACAACAGTAGATGGAAAACCGAAAAACTTAGATGCGAGTATTACGAGTATCATTCATGAA
ATTGGTGTACCTGCTCATATTAAAGGGTATATGTATTTACGAGAAGCGATCTCTATGGTATACAATGACATCGAATTATT
AGGATCTATTACGAAAGTATTATATCCAGATATCGCAAAAAAGTATAATACAACAGCAAGTCGTGTTGAACGAGCAATCC
GTCACGCAATAGAGGTAGCTTGGAGCCGTGGGAATATAGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAATTCTGAATTCATTGCGATGGTTGCGGATAAGCTGAGACTGGAACATAAGGCTAGCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7V7SAB2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.15

100

0.811


Multiple sequence alignment