Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   EUC39_RS25655 Genome accession   NZ_CP040334
Coordinates   5138872..5139555 (-) Length   227 a.a.
NCBI ID   WP_000350715.1    Uniprot ID   A0AAN4HLX4
Organism   Bacillus cereus strain DLOU-Changhai     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 5133872..5144555
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EUC39_RS25640 pepF 5134053..5135879 (-) 1827 WP_157418227.1 oligoendopeptidase F Regulator
  EUC39_RS25645 - 5135930..5137174 (-) 1245 WP_157418228.1 competence protein CoiA -
  EUC39_RS25650 - 5137255..5138799 (-) 1545 WP_000799191.1 cardiolipin synthase -
  EUC39_RS25655 mecA 5138872..5139555 (-) 684 WP_000350715.1 adaptor protein MecA Regulator
  EUC39_RS25660 - 5139901..5140575 (+) 675 WP_000362612.1 TerC family protein -
  EUC39_RS25665 spx 5140625..5141020 (-) 396 WP_000258267.1 transcriptional regulator Spx -
  EUC39_RS25670 - 5141614..5141817 (+) 204 WP_000559971.1 hypothetical protein -
  EUC39_RS25675 - 5141847..5143493 (-) 1647 WP_023521425.1 peptide ABC transporter substrate-binding protein -

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 26996.03 Da        Isoelectric Point: 3.9822

>NTDB_id=363321 EUC39_RS25655 WP_000350715.1 5138872..5139555(-) (mecA) [Bacillus cereus strain DLOU-Changhai]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQTGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=363321 EUC39_RS25655 WP_000350715.1 5138872..5139555(-) (mecA) [Bacillus cereus strain DLOU-Changhai]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGATAGAGGATTTAATCG
TGAAGAAATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTCACGAAAGCAGAGCTT
TCAAAGGACGGACAAAAGCTGGAACTACCGATAGGGGTAGACAAAATTATAGATATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAACAAGAGTTAGTCGAAGAGGTAGAAGAACAAACAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAATTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATCGATCGTATTTTAAG
TATTGTTTTAGAATATGGGGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGAAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACGATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

55.702

100

0.559


Multiple sequence alignment