Detailed information NTG0363014

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: FD724_RS11090
• Genome accession: NZ_CP040281
• Coordinates: 2527577..2528683 (-)
• Length: 368 a.a.
• NCBI ID: WP_114085264.1
• Uniprot ID: A0A6P1KKZ6
• Organism: Nostoc sp. C057
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2522577..2533683

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FD724_RS11075 (FD724_11120)	-	2523341..2525776 (-)	2436	WP_179072669.1	type IV pilus secretin family protein	-
FD724_RS11080 (FD724_11125)	-	2525934..2526710 (-)	777	WP_114085262.1	pilus assembly protein PilO	-
FD724_RS11085 (FD724_11130)	-	2526707..2527483 (-)	777	WP_179072670.1	PilN domain-containing protein	-
FD724_RS11090 (FD724_11135)	pilM	2527577..2528683 (-)	1107	WP_114085264.1	type IV pilus assembly protein PilM	Machinery gene
FD724_RS11095 (FD724_11140)	-	2528837..2530135 (+)	1299	WP_179072671.1	sugar ABC transporter substrate-binding protein	-
FD724_RS11100 (FD724_11145)	-	2530301..2531584 (-)	1284	WP_179072672.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-
FD724_RS11105 (FD724_11150)	-	2531699..2531824 (-)	126	WP_012411301.1	photosystem II protein Y	-
FD724_RS11110 (FD724_11155)	-	2532109..2532639 (-)	531	WP_179072673.1	gamma carbonic anhydrase family protein	-
FD724_RS11115 (FD724_11165)	-	2532880..2533392 (+)	513	WP_114085268.1	TIGR02652 family protein	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 40652.64 Da
• Isoelectric Point: 4.4545

>NTDB_id=363014 FD724_RS11090 WP_114085264.1 2527577..2528683(-) (pilM) [Nostoc sp. C057]
MVQKFNRLFGKSNKGVGIELAPERVNVVQLRKQRQGLKLETFTSVAVPEGVVTDGQITDPAAMAQLIQQALAESKIKTTR
VATGVPGRDSIVRIIPVPTELDDKELREMVLNHEAGLYLPYPREEADVDYQKLDYFVDEDGIEKVHVLLVATRKEITDTY
ISTFEQAGLQIDVLEINSFALIRTIREQLRQFGPQEAAVLVDIEFDSTEIAIIVNGVPQFSRTVPIGTYQMQTALARAMS
LPTSRDMELLHGMIIPPTPLDGGKTGVTEIDPGMAAILRVLGELTDELRRSIDFYLNQSENLEVAQILLAGPGGGLQQLD
EFFTQRLSLPTTQIDPIGSLSLEVDTDKYPQVQRSGLAIVLGLGMREV

Nucleotide

• Length: 1107 bp

>NTDB_id=363014 FD724_RS11090 WP_114085264.1 2527577..2528683(-) (pilM) [Nostoc sp. C057]
GTGGTACAAAAATTCAATCGTCTGTTTGGCAAATCGAATAAAGGGGTCGGCATTGAACTTGCTCCCGAACGGGTAAATGT
AGTTCAGCTACGCAAACAGCGTCAAGGCTTGAAACTAGAAACCTTTACATCGGTAGCAGTTCCAGAAGGCGTAGTTACCG
ATGGTCAAATCACCGATCCCGCAGCAATGGCGCAATTAATCCAGCAGGCGCTAGCTGAAAGCAAAATCAAAACTACTCGT
GTTGCCACTGGTGTACCAGGGCGAGATTCCATCGTTCGGATTATACCTGTACCAACGGAGTTAGATGACAAAGAACTGCG
AGAAATGGTGCTAAACCATGAAGCAGGTTTGTATTTACCCTATCCTCGTGAAGAAGCTGATGTAGATTATCAAAAACTTG
ACTACTTTGTAGATGAGGATGGCATTGAAAAAGTACATGTACTTCTAGTAGCCACTCGCAAGGAAATAACGGATACCTAT
ATAAGTACATTCGAACAGGCAGGACTACAAATTGATGTTTTAGAAATTAACAGTTTTGCCCTGATTAGGACTATTCGTGA
GCAACTGCGACAATTTGGGCCGCAAGAAGCAGCAGTCCTAGTTGATATAGAGTTCGACAGTACAGAAATCGCCATCATTG
TTAACGGAGTACCGCAATTTTCGCGCACAGTGCCCATAGGCACTTATCAAATGCAAACTGCGTTAGCAAGGGCAATGAGC
TTACCCACATCACGAGATATGGAACTGTTACACGGAATGATTATTCCCCCAACTCCCCTAGATGGGGGGAAAACCGGTGT
TACCGAAATCGATCCTGGTATGGCAGCCATATTAAGAGTATTGGGAGAACTAACGGATGAACTGCGCCGTTCAATCGATT
TTTACCTTAATCAAAGTGAAAATTTGGAGGTAGCGCAGATTTTATTAGCTGGGCCAGGAGGCGGACTCCAACAGCTAGAT
GAATTCTTTACCCAACGATTGAGCTTACCAACTACCCAAATAGATCCAATTGGGTCTTTGTCGTTAGAAGTTGACACTGA
TAAATATCCACAGGTACAACGCTCTGGCTTGGCGATTGTACTTGGTTTAGGTATGCGGGAGGTGTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (283-367)

• Type IV pilus assembly protein PilM; (PilM_2) (17-238)

3D structure

• AlphaFold DB: A0A6P1KKZ6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Synechocystis sp. PCC 6803	65.94	99.728	0.658