Detailed information NTG0362944

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: FED54_RS14210
• Genome accession: NZ_CP040259
• Coordinates: 2934306..2935007 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594572.1
• Uniprot ID: A0A009IN88
• Organism: Acinetobacter baumannii strain P7774
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2929306..2940007

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FED54_RS14175 (FED54_14175)	kdsB	2929829..2930590 (+)	762	WP_000680701.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
FED54_RS14180 (FED54_14180)	-	2930602..2931582 (+)	981	WP_001075418.1	DNA polymerase III subunit delta'	-
FED54_RS14185 (FED54_14185)	-	2931594..2931935 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
FED54_RS14190 (FED54_14190)	-	2931953..2932726 (+)	774	WP_000497298.1	TatD family hydrolase	-
FED54_RS14195 (FED54_14195)	-	2932764..2933372 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
FED54_RS14200 (FED54_14200)	-	2933382..2933936 (+)	555	WP_000841379.1	type II secretion system protein	-
FED54_RS14205 (FED54_14205)	xcpV	2933926..2934306 (+)	381	WP_000836910.1	type II secretion system minor pseudopilin GspI	Machinery gene
FED54_RS14210 (FED54_14210)	xcpW	2934306..2935007 (+)	702	WP_000594572.1	type II secretion system minor pseudopilin GspJ	Machinery gene
FED54_RS14215 (FED54_14215)	gspK	2935007..2935967 (+)	961	Protein_2732	type II secretion system minor pseudopilin GspK	-
FED54_RS14220 (FED54_14220)	-	2936197..2936793 (+)	597	WP_000908451.1	6-pyruvoyl trahydropterin synthase family protein	-
FED54_RS14225 (FED54_14225)	ung	2936844..2937557 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
FED54_RS14230 (FED54_14230)	-	2937554..2938678 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
FED54_RS14235 (FED54_14235)	tadA	2938685..2939188 (+)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
FED54_RS14240 (FED54_14240)	-	2939258..2939701 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26613.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=362944 FED54_RS14210 WP_000594572.1 2934306..2935007(+) (xcpW) [Acinetobacter baumannii strain P7774]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=362944 FED54_RS14210 WP_000594572.1 2934306..2935007(+) (xcpW) [Acinetobacter baumannii strain P7774]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCCAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATAGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A009IN88

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991