Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | FED54_RS14205 | Genome accession | NZ_CP040259 |
| Coordinates | 2933926..2934306 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836910.1 | Uniprot ID | A0AAQ1AB09 |
| Organism | Acinetobacter baumannii strain P7774 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2928926..2939306
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FED54_RS14175 (FED54_14175) | kdsB | 2929829..2930590 (+) | 762 | WP_000680701.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| FED54_RS14180 (FED54_14180) | - | 2930602..2931582 (+) | 981 | WP_001075418.1 | DNA polymerase III subunit delta' | - |
| FED54_RS14185 (FED54_14185) | - | 2931594..2931935 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| FED54_RS14190 (FED54_14190) | - | 2931953..2932726 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| FED54_RS14195 (FED54_14195) | - | 2932764..2933372 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| FED54_RS14200 (FED54_14200) | - | 2933382..2933936 (+) | 555 | WP_000841379.1 | type II secretion system protein | - |
| FED54_RS14205 (FED54_14205) | xcpV | 2933926..2934306 (+) | 381 | WP_000836910.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| FED54_RS14210 (FED54_14210) | xcpW | 2934306..2935007 (+) | 702 | WP_000594572.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| FED54_RS14215 (FED54_14215) | gspK | 2935007..2935967 (+) | 961 | Protein_2732 | type II secretion system minor pseudopilin GspK | - |
| FED54_RS14220 (FED54_14220) | - | 2936197..2936793 (+) | 597 | WP_000908451.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| FED54_RS14225 (FED54_14225) | ung | 2936844..2937557 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| FED54_RS14230 (FED54_14230) | - | 2937554..2938678 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| FED54_RS14235 (FED54_14235) | tadA | 2938685..2939188 (+) | 504 | WP_000033177.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13957.17 Da Isoelectric Point: 9.8004
>NTDB_id=362943 FED54_RS14205 WP_000836910.1 2933926..2934306(+) (xcpV) [Acinetobacter baumannii strain P7774]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHIVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHIVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=362943 FED54_RS14205 WP_000836910.1 2933926..2934306(+) (xcpV) [Acinetobacter baumannii strain P7774]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATAGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATAGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |