Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   FD735_RS08460 Genome accession   NZ_CP040231
Coordinates   1636495..1638264 (-) Length   589 a.a.
NCBI ID   WP_139658962.1    Uniprot ID   -
Organism   Streptococcus sp. 1643     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1631495..1643264
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FD735_RS08430 (FD735_08430) - 1632093..1632458 (-) 366 WP_000216434.1 Asp23/Gls24 family envelope stress response protein -
  FD735_RS08435 (FD735_08435) rpmB 1632611..1632799 (-) 189 WP_001140948.1 50S ribosomal protein L28 -
  FD735_RS08440 (FD735_08440) - 1632904..1633578 (-) 675 WP_000725755.1 hypothetical protein -
  FD735_RS08445 (FD735_08445) - 1633584..1634030 (-) 447 WP_000776591.1 LytTR family DNA-binding domain-containing protein -
  FD735_RS08450 (FD735_08450) - 1634144..1634647 (-) 504 WP_000800936.1 phosphatase PAP2 family protein -
  FD735_RS08455 (FD735_08455) rcrQ 1634745..1636505 (-) 1761 WP_139658961.1 ABC transporter ATP-binding protein Regulator
  FD735_RS08460 (FD735_08460) rcrP 1636495..1638264 (-) 1770 WP_139658962.1 ABC transporter ATP-binding protein Regulator
  FD735_RS08465 (FD735_08465) - 1638248..1638709 (-) 462 WP_042769107.1 MarR family winged helix-turn-helix transcriptional regulator -
  FD735_RS08470 (FD735_08470) - 1638902..1639606 (+) 705 WP_139658963.1 CD20-like domain-containing protein -
  FD735_RS08475 (FD735_08475) - 1639656..1640372 (-) 717 WP_000532894.1 YebC/PmpR family DNA-binding transcriptional regulator -
  FD735_RS08480 (FD735_08480) - 1640469..1641839 (-) 1371 WP_139658964.1 MATE family efflux transporter -
  FD735_RS08485 (FD735_08485) - 1641949..1642503 (+) 555 WP_000060284.1 GNAT family N-acetyltransferase -
  FD735_RS08490 (FD735_08490) - 1642635..1642829 (-) 195 WP_000415528.1 PspC domain-containing protein -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 65352.81 Da        Isoelectric Point: 7.1336

>NTDB_id=362665 FD735_RS08460 WP_139658962.1 1636495..1638264(-) (rcrP) [Streptococcus sp. 1643]
MKKLAKRITGKEWGMIVLTILFTCFSVYLELEVPTYISQITELLGTSGTQLGELWSPAAKMIGLSLLAFFSSVMVGFFAA
RVAASYTTHLRTDVFHRVLDFSQTEIKRFSIPSLLTRTTNDITQVQMLFTMGLQVVTRGPIMAIWAIGKILGKSEYWLWA
VVVAVIVNVLMTTVLMTLAFPKQSVIQKLTDKLNSITRESLTGIRVVRAYNAEDYQDKKFEAANDEVTRLNLFVNRLMAI
MNPIMMAISSGLSLAIYWIGAYIINDASLTERLPLFSDMVVFMSYAMQVVMGFLLMGALFIVLPRTLVSAGRINQVLDLH
SSIENPSHAQTADPSVQGQVEFRDVTFRYSKNSEAVVEHVTFKAEAGQTVAFIGSTGSGKSTLVNLLPRFYDVSDGQILV
DGVNVQDYNLEDLRNKVGYIPQKAVLFSGNVKGNLDFGKSKESPLSEAAMWQALELAQSKSFIEDKEAGLASEVAQGGTN
FSGGQRQRLAIARALARKLEILIFDDSFSALDYKTDRVLRQELAEKTKSMTKLIVAQRISTIMDADLILVLDQGKVVGQG
THKELLATNEVYQEIAYSQLSKEELEHGK

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=362665 FD735_RS08460 WP_139658962.1 1636495..1638264(-) (rcrP) [Streptococcus sp. 1643]
ATGAAGAAACTCGCTAAACGTATTACAGGAAAAGAGTGGGGAATGATCGTCCTTACGATTCTGTTTACTTGTTTCTCGGT
CTATCTCGAGTTAGAGGTGCCGACTTACATTTCGCAAATTACAGAATTACTGGGAACGTCTGGAACGCAGTTGGGTGAAC
TCTGGTCACCAGCTGCGAAGATGATTGGTTTGTCTTTATTGGCTTTCTTTTCATCTGTTATGGTTGGTTTCTTTGCCGCT
CGTGTTGCAGCATCCTATACAACCCATCTACGCACTGACGTATTTCATCGTGTTTTAGATTTTTCGCAGACAGAGATCAA
GCGCTTTTCAATCCCAAGTCTCTTGACTCGGACGACCAATGATATTACCCAGGTACAGATGCTCTTTACCATGGGATTAC
AGGTAGTGACTCGTGGGCCGATTATGGCTATCTGGGCCATTGGAAAAATCCTTGGGAAATCGGAATACTGGCTCTGGGCG
GTCGTTGTGGCTGTTATTGTGAATGTCTTGATGACCACCGTTCTTATGACTCTGGCTTTTCCAAAACAATCGGTCATCCA
AAAATTAACAGATAAACTCAATAGTATCACTCGTGAAAGTTTGACTGGGATTCGAGTTGTTCGCGCATACAATGCGGAAG
ATTACCAAGATAAGAAATTTGAAGCAGCCAACGATGAGGTAACACGTCTCAATCTCTTTGTCAATCGATTGATGGCCATT
ATGAACCCGATCATGATGGCGATTTCCAGTGGATTGAGTTTAGCCATTTACTGGATTGGTGCCTATATCATCAACGATGC
AAGTTTGACAGAACGTCTGCCACTCTTTAGTGATATGGTAGTCTTCATGTCCTATGCTATGCAGGTCGTAATGGGATTTC
TTCTCATGGGAGCACTCTTTATTGTTCTTCCTCGTACCTTGGTTTCGGCAGGACGTATCAATCAAGTATTGGATCTGCAT
TCTTCTATTGAAAATCCTAGTCATGCACAGACAGCGGATCCTTCAGTTCAAGGACAAGTGGAATTCCGTGATGTGACTTT
CCGCTACTCTAAAAACTCAGAAGCAGTCGTGGAACATGTCACTTTCAAGGCAGAAGCGGGTCAAACCGTAGCCTTCATCG
GATCGACTGGATCAGGAAAGTCCACCCTAGTCAACCTCTTGCCTCGTTTTTACGACGTTTCAGATGGACAAATCCTAGTG
GATGGTGTCAATGTACAAGATTACAATTTGGAAGATTTGCGCAATAAGGTCGGCTATATCCCTCAAAAAGCAGTCCTCTT
CTCAGGAAATGTCAAGGGGAACTTGGACTTTGGTAAGAGCAAAGAAAGTCCTCTAAGCGAAGCTGCTATGTGGCAAGCCT
TGGAATTGGCCCAGTCTAAAAGCTTCATCGAGGACAAGGAAGCAGGTCTTGCATCAGAAGTAGCCCAAGGTGGAACCAAC
TTCTCAGGAGGTCAAAGACAGCGTTTGGCCATTGCGCGTGCCTTGGCTCGTAAACTAGAGATTCTCATCTTTGATGACTC
TTTCTCAGCCTTGGACTACAAGACAGATCGTGTCCTTCGCCAAGAGCTAGCTGAGAAAACAAAATCCATGACCAAGCTCA
TCGTAGCGCAACGGATTTCTACCATTATGGACGCCGACCTGATCTTAGTTTTGGATCAAGGTAAAGTCGTGGGACAAGGC
ACCCACAAGGAACTTCTAGCTACCAACGAAGTCTACCAAGAAATTGCCTACTCACAACTATCGAAGGAGGAATTGGAACA
TGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(17-292)

ABC transporter (ABC_tran)

(358-507)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

65.058

100

0.664

Multiple sequence alignment