Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   FD735_RS08455 Genome accession   NZ_CP040231
Coordinates   1634745..1636505 (-) Length   586 a.a.
NCBI ID   WP_139658961.1    Uniprot ID   A0A5B7Y7P8
Organism   Streptococcus sp. 1643     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1629745..1641505
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FD735_RS08420 (FD735_08420) - 1629861..1630412 (-) 552 WP_061421420.1 SP0191 family lipoprotein -
  FD735_RS08425 (FD735_08425) - 1630423..1632090 (-) 1668 WP_139658960.1 DAK2 domain-containing protein -
  FD735_RS08430 (FD735_08430) - 1632093..1632458 (-) 366 WP_000216434.1 Asp23/Gls24 family envelope stress response protein -
  FD735_RS08435 (FD735_08435) rpmB 1632611..1632799 (-) 189 WP_001140948.1 50S ribosomal protein L28 -
  FD735_RS08440 (FD735_08440) - 1632904..1633578 (-) 675 WP_000725755.1 hypothetical protein -
  FD735_RS08445 (FD735_08445) - 1633584..1634030 (-) 447 WP_000776591.1 LytTR family DNA-binding domain-containing protein -
  FD735_RS08450 (FD735_08450) - 1634144..1634647 (-) 504 WP_000800936.1 phosphatase PAP2 family protein -
  FD735_RS08455 (FD735_08455) rcrQ 1634745..1636505 (-) 1761 WP_139658961.1 ABC transporter ATP-binding protein Regulator
  FD735_RS08460 (FD735_08460) rcrP 1636495..1638264 (-) 1770 WP_139658962.1 ABC transporter ATP-binding protein Regulator
  FD735_RS08465 (FD735_08465) - 1638248..1638709 (-) 462 WP_042769107.1 MarR family winged helix-turn-helix transcriptional regulator -
  FD735_RS08470 (FD735_08470) - 1638902..1639606 (+) 705 WP_139658963.1 CD20-like domain-containing protein -
  FD735_RS08475 (FD735_08475) - 1639656..1640372 (-) 717 WP_000532894.1 YebC/PmpR family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 64555.25 Da        Isoelectric Point: 5.1159

>NTDB_id=362664 FD735_RS08455 WP_139658961.1 1634745..1636505(-) (rcrQ) [Streptococcus sp. 1643]
MENKKVSVWKQCKPYMAGLQLPLLIAVVAAVISSIITVYGPTKIKEITNLISDGLATEIDLVAVSNIASFLVILYVFGAI
LNYTQAYIFSTSIQHFSKRLRTAIAEKINRLPLGYFDRHSQGDTLSRVTNDVDTAAQSLNQSLGTVLSASFLLIAVLVTM
FGMNWILALVTVVSTLVGFAAVSVIMAKSQGYFKAQQNNLAAVNGYVEEMYSGHNVVTSYNAVDTSKARFAGLNQDLHDS
IWKSQFISGIMMPAMFFVGNFSYVLVIIVGAALALEGHITIGIIVAFMVYVRTFSQPLSQIAQGITSLQQASAAMTRVLE
FLAEAEMQDESHKERQLSDMKGEVVFDHVSFGYTPERTIIHDFSATAHAGQKVAIVGPTGAGKTTIVNLLMKFYEIDKGS
IRIDGVDTKDMKRSEVHDAFSMVLQDTWLFEGTIRDNLIYNQTGISDERMIEAAKAVGIHHFIMTLPDGYDTILDDTVTL
SVGQRQLLTIARALIKDAPLLILDEATSSVDTRTEELIQKAMDRLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGN
HEELMAQGGFYADLYNSQFTEDEAEE

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=362664 FD735_RS08455 WP_139658961.1 1634745..1636505(-) (rcrQ) [Streptococcus sp. 1643]
ATGGAAAATAAAAAAGTTTCGGTCTGGAAACAGTGCAAACCTTATATGGCAGGCCTCCAACTCCCTCTCCTAATAGCAGT
TGTGGCTGCAGTCATTTCAAGTATCATTACCGTTTATGGTCCAACTAAGATTAAAGAAATTACTAACTTGATTTCAGATG
GTTTGGCTACAGAAATCGACTTGGTAGCTGTGTCAAACATTGCTAGCTTTTTAGTGATTCTCTATGTATTTGGCGCCATC
CTTAACTATACACAGGCCTATATATTTTCAACGAGTATCCAACATTTTTCAAAACGCTTGCGGACGGCTATCGCTGAAAA
AATCAATCGTTTGCCACTTGGCTATTTTGACCGTCATTCACAAGGAGATACCCTTTCGCGCGTGACCAATGATGTGGATA
CAGCAGCGCAATCTCTCAACCAAAGTCTAGGGACAGTTCTTTCAGCTAGTTTCTTGTTGATTGCTGTCTTGGTGACCATG
TTTGGGATGAACTGGATTTTGGCATTGGTAACCGTTGTATCAACTCTTGTTGGTTTTGCGGCGGTTTCCGTAATCATGGC
TAAGTCACAGGGTTATTTTAAAGCCCAACAAAATAATCTAGCAGCCGTCAATGGTTATGTGGAAGAGATGTACTCTGGAC
ACAATGTAGTGACCAGCTACAACGCAGTGGACACCTCCAAAGCGAGATTTGCAGGCTTAAACCAAGACTTGCATGATAGT
ATCTGGAAATCTCAGTTTATCTCTGGTATCATGATGCCAGCCATGTTCTTTGTTGGGAACTTTAGTTATGTCTTAGTCAT
CATCGTTGGAGCTGCGCTGGCGTTAGAAGGGCATATCACAATAGGGATTATTGTAGCCTTTATGGTTTACGTACGGACCT
TCTCCCAACCTCTGTCACAGATTGCCCAAGGGATTACGAGCTTGCAACAAGCGAGTGCAGCCATGACTCGTGTATTAGAA
TTTCTAGCTGAAGCAGAGATGCAGGATGAATCTCATAAGGAGAGACAATTGAGCGACATGAAAGGGGAAGTAGTCTTTGA
TCACGTGTCCTTTGGCTATACACCAGAGCGCACCATTATCCATGACTTTTCTGCGACAGCTCATGCAGGTCAGAAGGTTG
CTATCGTTGGACCGACTGGGGCTGGGAAGACAACCATTGTCAATCTTTTGATGAAGTTCTATGAGATAGATAAGGGAAGT
ATCCGTATCGATGGTGTGGATACCAAGGACATGAAGCGCTCTGAAGTGCACGATGCCTTTTCAATGGTCTTGCAGGATAC
TTGGCTCTTTGAAGGAACCATTCGTGATAATCTCATCTACAACCAAACAGGGATTAGTGATGAACGAATGATTGAAGCAG
CAAAAGCAGTAGGAATCCACCACTTTATCATGACCCTACCAGATGGATACGATACTATTTTAGATGATACAGTGACCTTG
TCAGTCGGACAGAGACAGCTCTTAACCATTGCTCGTGCCCTTATCAAAGATGCACCACTCTTGATTTTGGATGAAGCGAC
ATCCTCAGTCGACACACGTACAGAGGAGTTGATTCAAAAAGCCATGGACCGTTTGATGGAAGGTCGAACTTCCTTTGTCA
TCGCCCACCGCTTGTCAACCATCCGAAATGCAGACTTGATCTTGGTCATGAAAGATGGAAATATCATCGAACAAGGCAAT
CATGAAGAACTCATGGCTCAAGGTGGTTTCTATGCGGATCTCTATAATAGTCAGTTTACAGAAGACGAAGCAGAAGAATA
A

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(23-298)

ABC transporter (ABC_tran)

(361-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5B7Y7P8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

66.61

99.659

0.664

Multiple sequence alignment