Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   FD735_RS01330 Genome accession   NZ_CP040231
Coordinates   230586..231623 (+) Length   345 a.a.
NCBI ID   WP_000730772.1    Uniprot ID   A0A1X1GB13
Organism   Streptococcus sp. 1643     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 225586..236623
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FD735_RS01295 (FD735_01295) yidC 225621..226550 (-) 930 WP_139659089.1 membrane protein insertase YidC -
  FD735_RS01300 (FD735_01300) - 226628..226906 (-) 279 WP_139658301.1 acylphosphatase -
  FD735_RS01305 (FD735_01305) - 226940..227680 (+) 741 WP_139658302.1 RNA methyltransferase -
  FD735_RS01310 (FD735_01310) - 227735..228418 (+) 684 WP_139658303.1 Bax inhibitor-1/YccA family protein -
  FD735_RS01315 (FD735_01315) asnA 228528..229520 (+) 993 WP_139658304.1 aspartate--ammonia ligase -
  FD735_RS01320 (FD735_01320) rsmD 229585..230124 (+) 540 WP_000706945.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  FD735_RS01325 (FD735_01325) coaD 230114..230602 (+) 489 WP_139658305.1 pantetheine-phosphate adenylyltransferase -
  FD735_RS01330 (FD735_01330) sepM 230586..231623 (+) 1038 WP_000730772.1 SepM family pheromone-processing serine protease Regulator
  FD735_RS01335 (FD735_01335) - 231679..231909 (+) 231 WP_002892633.1 DUF1146 family protein -
  FD735_RS01340 (FD735_01340) murA 231933..233216 (+) 1284 WP_049505186.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  FD735_RS01345 (FD735_01345) - 233203..233397 (+) 195 WP_000739701.1 DNA-directed RNA polymerase subunit beta -
  FD735_RS01350 (FD735_01350) endA 233438..234262 (+) 825 WP_049505185.1 DNA/RNA non-specific endonuclease Machinery gene
  FD735_RS01355 (FD735_01355) - 234403..235734 (+) 1332 WP_071851874.1 hemolysin family protein -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37539.74 Da        Isoelectric Point: 5.5304

>NTDB_id=362623 FD735_RS01330 WP_000730772.1 230586..231623(+) (sepM) [Streptococcus sp. 1643]
MKKKTRWPLYVILALVLTFLAFVVPLPYYIEVPGGAEDIRRVLKVNETEDTEAGAYQFVTVGIRHATLSHLVYAWLTPFT
DIRSAKETTGGSTDAEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYLGVYVLTVTDNSTFKGILNIADTVTAVNDKTF
DSSKDLVDYVNSQQLGDTVKVTYEEDGKVKSAEGKIITLENGKNGIGIGLIDRTEVTSDVPIRFSTAGIGGPSAGLMFSL
AIYTQIADPGLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVAASRQGANIFFAPDNPVTEEAKKADPNAKSNYETALEAAK
TIKTEMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=362623 FD735_RS01330 WP_000730772.1 230586..231623(+) (sepM) [Streptococcus sp. 1643]
ATGAAGAAAAAAACTAGATGGCCCTTATATGTCATCCTAGCACTAGTATTGACTTTTTTAGCCTTTGTAGTACCTTTACC
TTACTACATAGAAGTTCCAGGTGGAGCGGAAGATATTCGTCGCGTTTTGAAAGTCAATGAAACAGAAGACACAGAAGCAG
GAGCTTACCAGTTTGTAACAGTCGGCATTCGACATGCAACCCTATCGCATCTTGTCTATGCTTGGTTAACGCCTTTCACG
GATATTAGAAGTGCCAAGGAGACTACGGGTGGCTCTACTGATGCAGAGTTTATGCGGATCAATCAGTTCTACATGCAAAC
TTCTCAAAATATGGCCAAATATCAAGGATTGAAGACGGCTGGAAAGGATATCGAACTCAAGTATCTGGGAGTCTATGTCT
TGACCGTGACGGACAATTCAACTTTTAAGGGCATTCTGAACATTGCAGATACCGTGACGGCTGTTAATGACAAAACATTT
GATAGTTCAAAAGACTTGGTCGACTATGTCAACTCTCAACAATTAGGGGATACGGTCAAGGTAACCTATGAAGAAGACGG
AAAAGTCAAGTCTGCAGAAGGTAAAATTATCACTCTCGAAAACGGGAAAAACGGGATTGGGATTGGTTTGATTGACCGTA
CAGAAGTGACCAGTGATGTTCCGATTCGCTTTTCAACAGCTGGTATAGGCGGGCCAAGTGCCGGTCTCATGTTTAGTCTC
GCTATTTACACCCAGATAGCAGATCCAGGACTTCGTAATGGCCGCATCGTTGCGGGAACGGGAACTATTGATCGCGATGG
AAATGTTGGCGACATCGGTGGAATTGACAAAAAAGTGGTTGCAGCCTCTCGTCAGGGAGCCAACATCTTTTTTGCTCCTG
ACAATCCAGTCACCGAGGAAGCAAAAAAAGCGGATCCCAATGCGAAAAGCAACTATGAAACAGCCCTAGAAGCCGCTAAA
ACGATCAAAACAGAGATGAAAATCGTTCCGGTTAAGACCTTGCAGGATGCGATTGATTACCTTAAAAACAATCCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1X1GB13

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

59.942

99.13

0.594


Multiple sequence alignment