Detailed information
Bioinformatically predicted
Overview
| Name | luxP | Type | Regulator |
| Locus tag | FDZ90_RS15545 | Genome accession | NZ_CP040173 |
| Coordinates | 188725..189819 (-) | Length | 364 a.a. |
| NCBI ID | WP_000823678.1 | Uniprot ID | Q9KLK6 |
| Organism | Vibrio cholerae strain VC1374 | ||
| Function | autoinducer sensor (predicted from homology) Competence regulation |
||
Genomic Context
Location: 183725..194819
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FDZ90_RS15525 (FDZ90_15995) | - | 184065..184463 (+) | 399 | WP_000831416.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| FDZ90_RS15530 (FDZ90_16005) | - | 184715..185233 (+) | 519 | WP_000914961.1 | hypothetical protein | - |
| FDZ90_RS15535 (FDZ90_16010) | - | 185477..186142 (+) | 666 | WP_000268204.1 | flagellar brake protein | - |
| FDZ90_RS15540 (FDZ90_16015) | luxQ | 186134..188707 (-) | 2574 | WP_001026306.1 | quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ | Regulator |
| FDZ90_RS15545 (FDZ90_16020) | luxP | 188725..189819 (-) | 1095 | WP_000823678.1 | autoinducer 2-binding periplasmic protein LuxP | Regulator |
| FDZ90_RS15550 (FDZ90_16025) | traF | 190031..191191 (-) | 1161 | WP_001025860.1 | conjugal transfer protein TraF | - |
| FDZ90_RS15555 (FDZ90_16030) | - | 191293..191598 (-) | 306 | WP_000429067.1 | GIY-YIG nuclease family protein | - |
| FDZ90_RS15560 (FDZ90_16035) | - | 191615..192265 (-) | 651 | WP_001025631.1 | YceH family protein | - |
| FDZ90_RS15565 (FDZ90_16040) | - | 192307..192504 (-) | 198 | WP_001246071.1 | hypothetical protein | - |
| FDZ90_RS15570 (FDZ90_16045) | - | 192692..193012 (+) | 321 | WP_001089529.1 | DUF496 family protein | - |
| FDZ90_RS15575 (FDZ90_16055) | - | 193425..193676 (+) | 252 | WP_001882582.1 | YgjV family protein | - |
Sequence
Protein
Download Length: 364 a.a. Molecular weight: 41196.81 Da Isoelectric Point: 6.3129
>NTDB_id=362471 FDZ90_RS15545 WP_000823678.1 188725..189819(-) (luxP) [Vibrio cholerae strain VC1374]
MKRKLISPLFLIAALFSSTGQADSLKGYWHYDEFLAEFPEQRPISELFAQTVRDKPSALTVAQEQPVIISVVYPGQQISD
YWVRNIKAFEKRMDALGIRYQINQVFTRPNLDTRQQSVSLMEALKNKSDYLIFTLDTTRHRKFIEHVLHSSETKLILQNI
TTPVKDWQGKQPMMYIGFDHEYGAQLLAQYYQAHAPKKPYSVLYFSEGYISEARGDTFIQDMNAVHHFPLASSYYTKATE
QSGYEATLNIVKNNPEIGFIYACATDVALGAAQALKELNRQDILVNGWGGGSAELEALAKGELDVTVMRMNDDTGVAMAE
AIKWDLEGKSVPLVYSGDFEVVTKQDSAARIAELKARAFRYSDR
MKRKLISPLFLIAALFSSTGQADSLKGYWHYDEFLAEFPEQRPISELFAQTVRDKPSALTVAQEQPVIISVVYPGQQISD
YWVRNIKAFEKRMDALGIRYQINQVFTRPNLDTRQQSVSLMEALKNKSDYLIFTLDTTRHRKFIEHVLHSSETKLILQNI
TTPVKDWQGKQPMMYIGFDHEYGAQLLAQYYQAHAPKKPYSVLYFSEGYISEARGDTFIQDMNAVHHFPLASSYYTKATE
QSGYEATLNIVKNNPEIGFIYACATDVALGAAQALKELNRQDILVNGWGGGSAELEALAKGELDVTVMRMNDDTGVAMAE
AIKWDLEGKSVPLVYSGDFEVVTKQDSAARIAELKARAFRYSDR
Nucleotide
Download Length: 1095 bp
>NTDB_id=362471 FDZ90_RS15545 WP_000823678.1 188725..189819(-) (luxP) [Vibrio cholerae strain VC1374]
ATGAAAAGAAAGCTAATATCTCCGCTGTTTCTGATAGCAGCACTCTTCAGCTCAACTGGTCAAGCCGATTCATTAAAAGG
CTATTGGCATTATGATGAATTTCTTGCTGAGTTCCCTGAACAGCGGCCAATTTCCGAGCTTTTTGCTCAAACAGTTCGTG
ATAAACCGAGTGCGTTGACGGTGGCGCAAGAACAACCCGTCATTATTTCGGTGGTCTATCCCGGACAGCAAATTTCTGAC
TATTGGGTTCGCAACATCAAAGCGTTTGAAAAGCGAATGGATGCTTTGGGGATTCGCTATCAAATCAATCAGGTGTTTAC
TCGCCCGAATCTTGATACTCGCCAGCAGAGTGTTTCCTTGATGGAAGCGCTGAAAAATAAGAGCGACTATCTGATTTTTA
CCTTAGATACCACCCGTCACCGCAAATTCATTGAGCATGTGCTGCACTCCTCCGAAACGAAACTGATTTTGCAAAACATC
ACGACGCCAGTCAAAGATTGGCAAGGCAAGCAGCCCATGATGTACATCGGTTTTGATCATGAGTACGGTGCGCAATTATT
GGCGCAATATTACCAAGCACATGCTCCGAAAAAGCCGTACTCAGTACTTTATTTTTCCGAGGGGTATATCAGTGAAGCGC
GGGGAGACACCTTCATTCAAGATATGAACGCGGTGCACCATTTTCCGTTGGCTTCTTCCTATTACACCAAGGCAACCGAA
CAAAGTGGCTATGAAGCGACCCTAAACATCGTCAAGAATAATCCAGAAATTGGCTTTATTTACGCCTGTGCGACGGACGT
CGCTTTGGGAGCTGCGCAGGCACTGAAAGAGCTGAATCGACAAGATATTCTGGTCAATGGTTGGGGAGGCGGTTCGGCAG
AGCTTGAAGCGCTTGCCAAAGGAGAATTGGATGTCACTGTGATGCGTATGAATGACGATACGGGTGTGGCGATGGCTGAA
GCGATTAAATGGGATTTGGAAGGGAAATCCGTACCTTTGGTCTATTCAGGCGATTTTGAAGTGGTCACCAAACAAGATTC
AGCAGCACGTATTGCAGAACTGAAAGCTCGGGCTTTCCGTTATTCGGATCGTTAG
ATGAAAAGAAAGCTAATATCTCCGCTGTTTCTGATAGCAGCACTCTTCAGCTCAACTGGTCAAGCCGATTCATTAAAAGG
CTATTGGCATTATGATGAATTTCTTGCTGAGTTCCCTGAACAGCGGCCAATTTCCGAGCTTTTTGCTCAAACAGTTCGTG
ATAAACCGAGTGCGTTGACGGTGGCGCAAGAACAACCCGTCATTATTTCGGTGGTCTATCCCGGACAGCAAATTTCTGAC
TATTGGGTTCGCAACATCAAAGCGTTTGAAAAGCGAATGGATGCTTTGGGGATTCGCTATCAAATCAATCAGGTGTTTAC
TCGCCCGAATCTTGATACTCGCCAGCAGAGTGTTTCCTTGATGGAAGCGCTGAAAAATAAGAGCGACTATCTGATTTTTA
CCTTAGATACCACCCGTCACCGCAAATTCATTGAGCATGTGCTGCACTCCTCCGAAACGAAACTGATTTTGCAAAACATC
ACGACGCCAGTCAAAGATTGGCAAGGCAAGCAGCCCATGATGTACATCGGTTTTGATCATGAGTACGGTGCGCAATTATT
GGCGCAATATTACCAAGCACATGCTCCGAAAAAGCCGTACTCAGTACTTTATTTTTCCGAGGGGTATATCAGTGAAGCGC
GGGGAGACACCTTCATTCAAGATATGAACGCGGTGCACCATTTTCCGTTGGCTTCTTCCTATTACACCAAGGCAACCGAA
CAAAGTGGCTATGAAGCGACCCTAAACATCGTCAAGAATAATCCAGAAATTGGCTTTATTTACGCCTGTGCGACGGACGT
CGCTTTGGGAGCTGCGCAGGCACTGAAAGAGCTGAATCGACAAGATATTCTGGTCAATGGTTGGGGAGGCGGTTCGGCAG
AGCTTGAAGCGCTTGCCAAAGGAGAATTGGATGTCACTGTGATGCGTATGAATGACGATACGGGTGTGGCGATGGCTGAA
GCGATTAAATGGGATTTGGAAGGGAAATCCGTACCTTTGGTCTATTCAGGCGATTTTGAAGTGGTCACCAAACAAGATTC
AGCAGCACGTATTGCAGAACTGAAAGCTCGGGCTTTCCGTTATTCGGATCGTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxP | Vibrio cholerae strain A1552 |
100 |
100 |
1 |