Detailed information NTG0362403

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: FAY22_RS14575
• Genome accession: NZ_CP040128
• Coordinates: 3173237..3174313 (+)
• Length: 358 a.a.
• NCBI ID: WP_146330877.1
• Uniprot ID: A0A5B8N819
• Organism: Noviherbaspirillum sp. UKPF54
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3168237..3179313

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FAY22_RS14550 (FAY22_14550)	-	3168860..3169129 (-)	270	WP_146330873.1	YfhL family 4Fe-4S dicluster ferredoxin	-
FAY22_RS14555 (FAY22_14555)	coaD	3169152..3169640 (-)	489	WP_146330874.1	pantetheine-phosphate adenylyltransferase	-
FAY22_RS14560 (FAY22_14560)	rsmD	3169753..3170385 (-)	633	WP_146330875.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
FAY22_RS14565 (FAY22_14565)	-	3170390..3171712 (-)	1323	WP_146333461.1	pitrilysin family protein	-
FAY22_RS14570 (FAY22_14570)	-	3171730..3173097 (-)	1368	WP_146330876.1	pitrilysin family protein	-
FAY22_RS14575 (FAY22_14575)	pilA	3173237..3174313 (+)	1077	WP_146330877.1	signal recognition particle-docking protein FtsY	Machinery gene
FAY22_RS14580 (FAY22_14580)	-	3174315..3175001 (+)	687	WP_146330878.1	cell division ATP-binding protein FtsE	-
FAY22_RS14585 (FAY22_14585)	ftsX	3174998..3175924 (+)	927	WP_146330879.1	permease-like cell division protein FtsX	-
FAY22_RS14590 (FAY22_14590)	rpoH	3176206..3177102 (+)	897	WP_146330880.1	RNA polymerase sigma factor RpoH	-
FAY22_RS14595 (FAY22_14595)	-	3177186..3177815 (-)	630	WP_146330881.1	SCO family protein	-
FAY22_RS14600 (FAY22_14600)	cyoE	3177821..3178705 (-)	885	WP_146330882.1	heme o synthase	-

Sequence

Protein

• Length: 358 a.a.
• Molecular weight: 38231.25 Da
• Isoelectric Point: 5.9977

>NTDB_id=362403 FAY22_RS14575 WP_146330877.1 3173237..3174313(+) (pilA) [Noviherbaspirillum sp. UKPF54]
MFSFFKRKSKDTPAVEPAPEALATPPAAESAPVAEAPVATAPEAEIIEEIVTAAPLRAEQKRSWLQKLKAGLSKTSTNLT
TLFVGAKIDDDLYDELESALLVSDAGVEATQFLLDALKKKVKSEKLTEAQQVKDALRALLVEMLAPLQKPMVLGRHQPLV
MMIAGVNGAGKTTTIGKLAKHMQTHHQSVLLAAGDTFRAAAREQLAIWGARNDVTVIAQESGDPAAVAFDAVQSAKARNV
NVVMVDTAGRLPTQLHLMEELKKIKRVIGKGMESAPHELLLVIDGNTGQNALAQVKAFDDALQLTGLIVTKLDGTAKGGI
LAAIAKTRPVPVYFIGVGEQIEDLQPFNAEEFVDALLS

Nucleotide

• Length: 1077 bp

>NTDB_id=362403 FAY22_RS14575 WP_146330877.1 3173237..3174313(+) (pilA) [Noviherbaspirillum sp. UKPF54]
ATGTTTAGCTTCTTCAAAAGAAAATCGAAAGACACACCGGCGGTAGAGCCGGCGCCGGAAGCCTTGGCGACACCTCCCGC
GGCGGAATCGGCACCGGTTGCCGAAGCCCCGGTGGCGACCGCGCCCGAAGCGGAAATCATCGAAGAGATCGTCACCGCGG
CTCCGCTGCGGGCCGAACAAAAGCGCTCCTGGCTGCAAAAGCTCAAAGCCGGCCTGTCGAAAACGTCCACCAACCTCACC
ACCCTGTTCGTCGGCGCGAAGATCGACGACGACCTCTACGACGAACTCGAATCGGCGCTGCTGGTCTCCGACGCCGGCGT
CGAGGCGACCCAGTTCCTGCTGGACGCCTTGAAGAAGAAGGTCAAGAGCGAGAAACTGACCGAGGCCCAGCAGGTCAAGG
ACGCATTGCGCGCCCTGCTCGTCGAGATGCTGGCGCCGCTGCAAAAGCCGATGGTGCTGGGGCGCCATCAGCCGCTGGTG
ATGATGATCGCGGGCGTCAACGGCGCCGGCAAGACCACCACCATCGGCAAGCTTGCCAAGCACATGCAGACCCATCATCA
ATCAGTGCTGCTGGCCGCCGGCGACACGTTCCGCGCCGCCGCCCGCGAACAGCTCGCGATCTGGGGCGCTCGCAACGACG
TGACCGTGATCGCGCAGGAATCGGGCGACCCGGCAGCCGTCGCCTTCGACGCAGTGCAGTCGGCCAAGGCGCGCAACGTC
AATGTGGTCATGGTCGACACCGCCGGACGCCTGCCGACGCAGCTGCATCTGATGGAAGAGTTGAAGAAGATCAAGCGCGT
CATCGGCAAGGGCATGGAAAGCGCGCCGCACGAGCTATTGCTCGTCATTGACGGCAACACGGGACAGAACGCGCTGGCGC
AAGTGAAAGCGTTTGACGATGCGTTGCAGCTGACCGGCCTGATCGTCACCAAGCTCGACGGTACGGCCAAAGGCGGCATC
CTGGCGGCGATCGCGAAAACCCGCCCGGTGCCGGTGTACTTCATCGGGGTGGGCGAGCAGATCGAGGATTTGCAGCCGTT
TAATGCCGAAGAATTCGTGGACGCGCTGCTCAGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (159-357)

• SRP54-type protein, helical bundle domain (SRP54_N) (78-137)

3D structure

• AlphaFold DB: A0A5B8N819

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	50.721	100	0.589