Detailed information    

insolico Bioinformatically predicted

Overview

Name   chpA   Type   Regulator
Locus tag   FDQ49_RS12815 Genome accession   NZ_CP040105
Coordinates   2700750..2705273 (+) Length   1507 a.a.
NCBI ID   WP_022575702.1    Uniprot ID   -
Organism   Acinetobacter nosocomialis M2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2695750..2710273
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FDQ49_RS12790 (FDQ49_12790) - 2696187..2696825 (-) 639 WP_002051486.1 hypothetical protein -
  FDQ49_RS12795 (FDQ49_12795) pilG 2697108..2697491 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  FDQ49_RS12800 (FDQ49_12800) - 2697518..2697880 (+) 363 WP_002051151.1 PleD family two-component system response regulator -
  FDQ49_RS12805 (FDQ49_12805) - 2697938..2698474 (+) 537 WP_004885375.1 chemotaxis protein CheW -
  FDQ49_RS12810 (FDQ49_12810) - 2698521..2700602 (+) 2082 WP_022575701.1 methyl-accepting chemotaxis protein -
  FDQ49_RS12815 (FDQ49_12815) chpA 2700750..2705273 (+) 4524 WP_022575702.1 hybrid sensor histidine kinase/response regulator Regulator
  FDQ49_RS12820 (FDQ49_12820) - 2705270..2705737 (+) 468 WP_022575703.1 hypothetical protein -
  FDQ49_RS12825 (FDQ49_12825) - 2705888..2706778 (+) 891 WP_022575704.1 alpha/beta fold hydrolase -
  FDQ49_RS12830 (FDQ49_12830) dapE 2706907..2708040 (-) 1134 WP_022575705.1 succinyl-diaminopimelate desuccinylase -
  FDQ49_RS12835 (FDQ49_12835) - 2708166..2708309 (-) 144 WP_002051109.1 entericidin A/B family lipoprotein -
  FDQ49_RS12840 (FDQ49_12840) - 2708422..2709315 (-) 894 WP_022575706.1 DUF1853 family protein -
  FDQ49_RS12845 (FDQ49_12845) - 2709420..2709788 (+) 369 WP_022575707.1 YbaN family protein -

Sequence

Protein


Download         Length: 1507 a.a.        Molecular weight: 171538.01 Da        Isoelectric Point: 4.3311

>NTDB_id=362249 FDQ49_RS12815 WP_022575702.1 2700750..2705273(+) (chpA) [Acinetobacter nosocomialis M2]
MKEILKTLTEAMTLPEDSYSEQDAEFLEIFVEEIEEIFVDLQPLLNEWIQSENTATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQTLKLTPAIQSYVQLVFKFYFLKLVDNFKQKRAHAVDFRPLILLGQQLQQQQSLEPALEELLQLS
NTLTAETITGLELDYIEQNSLAEPIVEDVDTEIAINLDETLTLFMEEAEEHLTTIHQFLNQELHQYDSYNALIRALHTLR
GSSAMAQVETIFEASTKVEHLFKILLQEELSSNSDEILLLQEYREFIRDSLELLSKHSSNEQLEARLQQFNQSWDAYVEQ
HGDRTDPLTPSHGLVSQLLLLDVSELLDAELDFEKGIRNEFPDYLERLSEQADLLLQHTHSQAMLGLHEYTSQLKESYDV
LLDKPLLLQSDYIFEIYQKAHQQLIQLFDALAAGQRVGIVKQHQSILEELKLYTLHTPSVHNDLSQQDPASVEPLFNIEP
EPEAAVTVENLSDSADWAVLSQSVQQDRQYISSTQVNQNFDPDLLDIFLEEADELLEGIDTDLNIWVGEQENFAALNNLM
RYLHTLKGGANMVQATYLGSITHELESIYERLIQKQLVATSDLIDFIRLVQDDLADRLQIMREQQLDYAAPYTINALKRA
GQTSNFQPVPVVEIFDSESEIFSEQELISEVLIDEVPAEIEPVLTELEVHDDQLVFENVVTELATPVEAITSVTSQENEA
VVEEQDITAVVEQTFLEEAAELLEMADGLLKQWFEQRTNRSILLQLQRAVHSLKGGARMVGLEAVYAIAYQLENTFEQFA
LHHFNSNIYDHLLESAIAWLKDAIFKHNYQHFDGLQQSLENIQFFETNIQIPTKLTKTDLFSSEPVMTFIQGDGTEPPPM
MGAWEQTERLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLVEMELAIQRLADQLRRMEGELETQIIAK
HGIEHSRYTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSHKIRDTESLLLQQSRIQAEIQEGLMRTRLVPFSRLL
PRLQRIVRQTSTALNRPAELFVNNTEGELDRNILERLVTPLEHMLRNAIDHGLEDRAQRQKVNKPESGCIELNIQRQGTD
VVVVFSDDGQGIDVEKVRQKALLAGLIKPEQYLEEQDILQLIFHPGLSTAEQITQISGRGVGLDVVQSDIKALGGHVSVD
SVYGKGTTFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFESPKELFEYENKRYPLRYLSEFVGNQ
PMPRLNGMMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFASIGAIAGATILGDGQVCLILDGQNIARQIQS
TPRHKQLSEAVYRQRESDERRLVMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGF
EVLNLVRHHDMHQYMPIIMITSRTGEKHRERAFSLGVSQYMGKPFQEEELLENIDALLVAFESEVKS

Nucleotide


Download         Length: 4524 bp        

>NTDB_id=362249 FDQ49_RS12815 WP_022575702.1 2700750..2705273(+) (chpA) [Acinetobacter nosocomialis M2]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGACGCTACCTGAAGATAGCTATTCTGAACAAGATGCTGAGTTTCT
TGAAATTTTCGTTGAAGAAATTGAAGAAATTTTTGTTGATTTGCAACCATTATTAAATGAATGGATACAGTCTGAGAATA
CTGCTACGCTCACTGAAATTCGCCGCCATTTCCACACTTTAAAAGGTTCTGGAAGAATGATCGGTGCTAAATCTTCAGCT
GAGCTTGCTTGGACAGTTGAAGACACGCTTAATCGCGTAATCAATCAAACCCTTAAATTGACTCCAGCAATCCAGAGCTA
TGTTCAATTAGTATTTAAGTTCTATTTTCTTAAATTAGTAGATAACTTTAAGCAAAAAAGAGCACATGCAGTAGATTTTC
GACCGCTTATTTTATTAGGCCAACAACTACAACAACAGCAAAGTTTAGAACCTGCTTTAGAAGAGCTTTTACAGCTTTCA
AATACGCTTACTGCCGAAACAATAACTGGGCTTGAGCTAGACTATATTGAGCAAAACTCATTGGCTGAGCCAATTGTTGA
AGATGTAGATACTGAAATTGCAATAAATCTAGATGAAACTTTGACCTTGTTTATGGAAGAGGCAGAGGAGCATTTAACTA
CAATTCATCAGTTCTTAAATCAAGAGCTGCATCAGTATGATAGTTATAATGCCTTAATACGCGCGCTACATACTTTGCGT
GGCAGTTCTGCGATGGCGCAGGTCGAAACAATTTTTGAAGCCAGTACCAAAGTTGAGCACTTATTTAAAATACTGTTGCA
AGAAGAACTTTCTTCTAACTCAGATGAAATTTTATTATTACAAGAATATCGTGAGTTTATTAGAGATAGCTTAGAGCTTC
TATCTAAACATAGTTCAAATGAACAGCTTGAAGCGAGATTGCAGCAGTTTAATCAATCATGGGATGCTTACGTTGAGCAA
CATGGTGACCGAACAGATCCATTAACCCCTTCTCATGGTTTGGTATCACAACTATTGTTGTTAGATGTTTCTGAATTGTT
AGATGCAGAGTTAGATTTTGAGAAAGGCATTCGTAATGAGTTTCCAGATTATCTTGAACGTCTAAGTGAACAAGCTGATC
TGCTGTTACAACATACACACTCTCAAGCAATGCTGGGTTTACATGAATATACCAGTCAATTGAAAGAAAGTTATGATGTA
TTACTTGATAAACCTCTATTATTGCAATCAGACTATATATTTGAAATTTATCAAAAAGCGCATCAACAGCTTATTCAATT
GTTCGATGCCTTGGCTGCTGGTCAGCGAGTTGGTATTGTTAAGCAACATCAAAGTATTCTAGAAGAATTAAAACTTTATA
CCCTACATACTCCGAGCGTTCACAATGACCTGTCTCAGCAAGATCCTGCTTCTGTTGAGCCACTATTTAATATCGAACCA
GAGCCAGAAGCTGCTGTTACGGTAGAGAATTTATCAGACTCTGCAGACTGGGCAGTATTAAGCCAGAGTGTACAGCAAGA
TCGCCAATATATTTCCTCTACACAGGTAAATCAAAACTTTGATCCTGACCTTTTAGATATCTTTCTTGAAGAGGCTGATG
AACTACTGGAGGGAATTGATACCGATCTCAATATTTGGGTAGGTGAGCAAGAAAACTTTGCAGCCCTGAATAATCTAATG
CGCTATTTGCATACCTTGAAAGGTGGAGCAAATATGGTTCAGGCGACTTATCTAGGTTCGATTACCCATGAATTAGAAAG
CATATATGAGCGTTTAATTCAAAAGCAGTTAGTTGCAACTTCAGATTTAATTGATTTTATCCGTTTAGTACAAGATGACT
TGGCTGACCGTCTGCAAATCATGCGTGAACAACAATTAGATTATGCAGCTCCTTACACAATTAATGCGTTAAAACGAGCA
GGTCAAACCTCTAACTTCCAACCTGTACCAGTGGTTGAAATATTTGATAGTGAAAGTGAGATCTTCTCTGAACAAGAGCT
GATATCTGAAGTATTAATCGATGAAGTACCAGCAGAAATTGAGCCTGTTCTTACAGAATTAGAAGTTCATGATGATCAGC
TGGTATTTGAGAACGTTGTTACTGAGTTAGCTACGCCAGTTGAAGCAATAACATCCGTTACATCACAAGAGAATGAAGCG
GTAGTTGAAGAACAGGATATTACGGCTGTTGTTGAGCAGACATTCCTAGAAGAAGCTGCTGAATTGTTAGAAATGGCTGA
TGGGCTATTGAAACAATGGTTTGAGCAGCGTACAAACCGAAGTATCTTGCTTCAATTACAAAGAGCTGTGCACAGTTTGA
AGGGTGGTGCACGAATGGTCGGTTTAGAAGCCGTCTACGCGATTGCCTATCAACTCGAAAATACATTCGAACAATTTGCG
TTACATCACTTCAACTCGAATATTTATGACCATTTGCTCGAAAGTGCAATTGCATGGCTAAAAGATGCTATTTTCAAGCA
TAACTATCAACATTTCGATGGATTACAACAAAGTTTAGAAAATATTCAATTCTTTGAAACGAATATCCAAATTCCGACTA
AGTTAACGAAAACTGATTTGTTTAGCTCAGAACCTGTGATGACCTTCATACAAGGTGATGGTACAGAACCACCACCAATG
ATGGGCGCATGGGAGCAAACAGAACGTCTGGATCAGAACAATGAAATGATCCGTGTTTCAGCAGACTTGATCGAGAAGAT
GATTGATTTGTCTGGTGAGAACTCGATTAACCGTTCACGAATTGAAATGGACTTGAGCCAGTTTGGTCATACCTTGGTTG
AAATGGAATTGGCTATTCAACGACTTGCCGATCAGTTACGTCGAATGGAAGGCGAGTTAGAAACACAAATTATTGCCAAA
CATGGTATTGAGCACTCTCGTTATACCGACTTTGACCCTTTAGAGATGGATCAATATTCATCTTTAAATCAGTTATCGAA
ATCTCTTGCTGAATCTGCATCGGACTTGGTCGACTTTAAAAATACGTTATCTCACAAGATCAGAGATACAGAAAGTTTAC
TTTTACAACAGTCGCGTATTCAGGCAGAAATTCAAGAAGGCTTGATGCGAACACGATTGGTTCCATTTTCACGGTTGTTA
CCGCGTTTGCAGCGGATTGTGCGTCAAACATCTACAGCCTTGAATAGACCTGCTGAGCTTTTCGTAAATAATACCGAAGG
TGAGTTAGACCGTAACATTTTAGAACGTTTAGTGACACCACTCGAGCATATGCTCAGAAATGCAATTGACCATGGTCTAG
AAGACCGGGCACAGCGCCAAAAGGTGAATAAACCGGAATCAGGGTGTATTGAACTGAACATTCAGCGTCAAGGAACAGAC
GTTGTTGTTGTCTTTAGCGATGATGGACAAGGTATTGATGTAGAAAAAGTCCGCCAAAAAGCACTGCTTGCTGGTCTGAT
CAAGCCAGAACAATATTTAGAAGAGCAAGATATTCTACAGCTAATTTTCCATCCAGGTTTAAGTACCGCAGAACAGATTA
CTCAGATTTCTGGACGTGGTGTTGGTCTTGATGTCGTACAGAGCGATATTAAAGCTTTAGGTGGACATGTTAGCGTTGAC
TCTGTTTATGGTAAGGGAACAACATTTACGATACGTGTACCGACTACTGTAGCTGTAAGTGATGCCTTAATGGTAAAAGT
GGCAGATCAGCAATTTGCAATTCCACTTGCTCAAATTGATCGAATTGTTCGAGTTTCGCCAGCTTCTTTAGAGCAGTATT
TTGAAAGTCCTAAAGAACTATTTGAATATGAAAATAAGCGTTATCCATTACGTTATCTTTCAGAATTTGTTGGTAATCAA
CCAATGCCACGACTAAATGGCATGATGTATTCATTACCTGTCTTAATGATTAAAGCCAACAATGGCCAAACTGTGGCGTT
ACTTGTCGATCAGTTAATTGGTTCTCGAGCTCAAATTGTAGTGAAACCAATTGGTCAACAGTTCGCTAGCATTGGAGCAA
TTGCAGGTGCGACCATCTTAGGTGATGGACAGGTTTGTTTAATTTTAGACGGGCAAAATATTGCGCGACAAATTCAGTCT
ACACCGCGTCATAAACAGCTTAGTGAAGCAGTATATAGACAACGTGAATCAGACGAGCGCCGTCTCGTTATGATTGTCGA
TGACTCCGTAACTGTACGTAAGGTAACGTCTCGATTACTTGAACGCCAAGGCTACGATGTTGTTACGGCTAAAGATGGCG
TTGATGCCATAGAACAGCTAGAAAATATTAAGCCGGATTTGATGCTGCTTGATATTGAAATGCCACGTATGGATGGTTTC
GAAGTACTTAATCTTGTACGACATCATGATATGCATCAATACATGCCAATTATTATGATTACATCCAGAACAGGCGAAAA
ACATCGTGAACGGGCATTCTCGTTAGGTGTAAGTCAATATATGGGTAAACCGTTCCAAGAGGAAGAGCTACTAGAAAATA
TTGATGCTTTACTTGTAGCGTTTGAAAGCGAGGTCAAATCATGA

Domains

Predicted by InterproScan.

CheW-like domain (CheW)

(1222-1357)

Hpt domain (Hpt)

(25-106)

Hpt domain (Hpt)

(523-612)

Hpt domain (Hpt)

(733-797)

Hpt domain (Hpt)

(199-282)

Response regulator receiver domain (Response_reg)

(1383-1494)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(1079-1215)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

92.634

100

0.926

Multiple sequence alignment