Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | FDQ49_RS11200 | Genome accession | NZ_CP040105 |
| Coordinates | 2377803..2378363 (+) | Length | 186 a.a. |
| NCBI ID | WP_079377028.1 | Uniprot ID | - |
| Organism | Acinetobacter nosocomialis M2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2372803..2383363
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FDQ49_RS11175 (FDQ49_11175) | - | 2374944..2375075 (-) | 132 | WP_102990545.1 | hypothetical protein | - |
| FDQ49_RS11180 (FDQ49_11180) | rpoZ | 2375114..2375392 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| FDQ49_RS11185 (FDQ49_11185) | gmk | 2375465..2376094 (-) | 630 | WP_002051739.1 | guanylate kinase | - |
| FDQ49_RS11190 (FDQ49_11190) | ispH | 2376217..2377167 (+) | 951 | WP_002051768.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| FDQ49_RS11195 (FDQ49_11195) | fimU | 2377336..2377809 (+) | 474 | WP_022575992.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| FDQ49_RS11200 (FDQ49_11200) | pilV | 2377803..2378363 (+) | 561 | WP_079377028.1 | type IV pilus modification protein PilV | Machinery gene |
| FDQ49_RS11205 (FDQ49_11205) | pilW | 2378363..2379361 (+) | 999 | WP_022575991.1 | PilW family protein | Machinery gene |
| FDQ49_RS11210 (FDQ49_11210) | pilX | 2379358..2380173 (+) | 816 | WP_004711686.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 186 a.a. Molecular weight: 19890.00 Da Isoelectric Point: 8.2254
>NTDB_id=362239 FDQ49_RS11200 WP_079377028.1 2377803..2378363(+) (pilV) [Acinetobacter nosocomialis M2]
MLMHLNNLKAQAGVGLIEVLVALILLAIGVLGYVALQIRAMDASSEALTKSQAMIVMRGLAENIRTNSVQAGQYPAFVRS
YSNFSSTTVAPTSCFNTPCTPSQLAQFDAYQTAKNADQLGIKITMTNCPGVTSTMTLQRQCLFAFWGKTLPVTSTSGSTS
TVDVSNCITSSGIYVSNSKCLMMETY
MLMHLNNLKAQAGVGLIEVLVALILLAIGVLGYVALQIRAMDASSEALTKSQAMIVMRGLAENIRTNSVQAGQYPAFVRS
YSNFSSTTVAPTSCFNTPCTPSQLAQFDAYQTAKNADQLGIKITMTNCPGVTSTMTLQRQCLFAFWGKTLPVTSTSGSTS
TVDVSNCITSSGIYVSNSKCLMMETY
Nucleotide
Download Length: 561 bp
>NTDB_id=362239 FDQ49_RS11200 WP_079377028.1 2377803..2378363(+) (pilV) [Acinetobacter nosocomialis M2]
ATGCTAATGCATTTAAACAATCTGAAAGCTCAAGCAGGTGTTGGTTTAATAGAAGTTTTAGTTGCTTTAATTCTACTTGC
AATAGGAGTACTTGGTTATGTAGCACTTCAGATTAGAGCAATGGACGCATCTTCAGAAGCATTAACTAAATCTCAGGCGA
TGATAGTCATGAGGGGGTTAGCTGAAAATATTCGCACAAATAGTGTTCAAGCTGGTCAATATCCAGCATTTGTACGTAGT
TATAGTAATTTTTCATCAACTACAGTGGCTCCGACTTCCTGCTTTAATACGCCGTGTACGCCTTCACAGCTTGCTCAATT
TGACGCATATCAAACAGCAAAAAATGCAGATCAGCTGGGTATCAAAATTACAATGACAAATTGTCCAGGCGTTACTTCAA
CTATGACTTTACAAAGGCAATGTTTATTCGCTTTTTGGGGAAAAACTTTACCAGTAACGAGTACAAGTGGGAGTACATCA
ACTGTAGATGTATCAAATTGCATCACTAGTAGTGGAATTTATGTCTCTAATTCTAAGTGTTTAATGATGGAGACATATTG
A
ATGCTAATGCATTTAAACAATCTGAAAGCTCAAGCAGGTGTTGGTTTAATAGAAGTTTTAGTTGCTTTAATTCTACTTGC
AATAGGAGTACTTGGTTATGTAGCACTTCAGATTAGAGCAATGGACGCATCTTCAGAAGCATTAACTAAATCTCAGGCGA
TGATAGTCATGAGGGGGTTAGCTGAAAATATTCGCACAAATAGTGTTCAAGCTGGTCAATATCCAGCATTTGTACGTAGT
TATAGTAATTTTTCATCAACTACAGTGGCTCCGACTTCCTGCTTTAATACGCCGTGTACGCCTTCACAGCTTGCTCAATT
TGACGCATATCAAACAGCAAAAAATGCAGATCAGCTGGGTATCAAAATTACAATGACAAATTGTCCAGGCGTTACTTCAA
CTATGACTTTACAAAGGCAATGTTTATTCGCTTTTTGGGGAAAAACTTTACCAGTAACGAGTACAAGTGGGAGTACATCA
ACTGTAGATGTATCAAATTGCATCACTAGTAGTGGAATTTATGTCTCTAATTCTAAGTGTTTAATGATGGAGACATATTG
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Acinetobacter baumannii D1279779 |
75.269 |
100 |
0.753 |
| pilV | Acinetobacter baylyi ADP1 |
35.789 |
100 |
0.366 |