Detailed information NTG0362238

Bioinformatically predicted

Overview

• Name: fimU
• Type: Machinery gene
• Locus tag: FDQ49_RS11195
• Genome accession: NZ_CP040105
• Coordinates: 2377336..2377809 (+)
• Length: 157 a.a.
• NCBI ID: WP_022575992.1
• Uniprot ID: -
• Organism: Acinetobacter nosocomialis M2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2372336..2382809

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FDQ49_RS11170 (FDQ49_11170)	-	2372800..2374905 (-)	2106	WP_004711681.1	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	-
FDQ49_RS11175 (FDQ49_11175)	-	2374944..2375075 (-)	132	WP_102990545.1	hypothetical protein	-
FDQ49_RS11180 (FDQ49_11180)	rpoZ	2375114..2375392 (-)	279	WP_000135049.1	DNA-directed RNA polymerase subunit omega	-
FDQ49_RS11185 (FDQ49_11185)	gmk	2375465..2376094 (-)	630	WP_002051739.1	guanylate kinase	-
FDQ49_RS11190 (FDQ49_11190)	ispH	2376217..2377167 (+)	951	WP_002051768.1	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	-
FDQ49_RS11195 (FDQ49_11195)	fimU	2377336..2377809 (+)	474	WP_022575992.1	Tfp pilus assembly protein FimT/FimU	Machinery gene
FDQ49_RS11200 (FDQ49_11200)	pilV	2377803..2378363 (+)	561	WP_079377028.1	type IV pilus modification protein PilV	Machinery gene
FDQ49_RS11205 (FDQ49_11205)	pilW	2378363..2379361 (+)	999	WP_022575991.1	PilW family protein	Machinery gene
FDQ49_RS11210 (FDQ49_11210)	pilX	2379358..2380173 (+)	816	WP_004711686.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene

Sequence

Protein

• Length: 157 a.a.
• Molecular weight: 16886.46 Da
• Isoelectric Point: 9.3359

>NTDB_id=362238 FDQ49_RS11195 WP_022575992.1 2377336..2377809(+) (fimU) [Acinetobacter nosocomialis M2]
MRGITPQEGFTLVELIVTIAVMAIIAMMAAPSMSNLLESKRLDTNQRDLISTLSEAKSQAVLSRQNVSVNLNSAASNTAT
LLNWQPTSNNTLTLKNIAADNTQSSLAITTLTFNANGVVSNITQDALISICNSRINKKKNFILTKLGALVFKAEETC

Nucleotide

• Length: 474 bp

>NTDB_id=362238 FDQ49_RS11195 WP_022575992.1 2377336..2377809(+) (fimU) [Acinetobacter nosocomialis M2]
ATGAGGGGAATTACTCCGCAAGAAGGGTTCACCTTAGTGGAACTCATCGTAACAATTGCAGTCATGGCTATTATTGCAAT
GATGGCTGCGCCGTCTATGTCAAATTTATTAGAAAGTAAACGATTAGATACTAATCAAAGAGATTTAATTAGTACTCTAT
CTGAGGCGAAAAGTCAGGCTGTGCTTAGTCGTCAGAATGTTTCAGTTAATTTGAATTCAGCGGCTTCTAATACTGCCACT
TTATTAAATTGGCAACCTACTTCTAACAACACCCTAACGCTAAAAAATATAGCTGCTGATAATACCCAAAGTTCTTTAGC
TATCACTACTTTAACATTTAACGCAAATGGAGTTGTGAGTAATATTACTCAGGATGCACTTATATCTATTTGTAATTCAA
GAATAAATAAAAAGAAAAATTTTATACTTACAAAACTTGGAGCTTTGGTTTTTAAAGCTGAGGAGACATGCTAA

Domains

Predicted by InterproScan.

• Type II transport protein GspH (GspH) (47-136)

• Prokaryotic N-terminal methylation motif (N_methyl) (7-29)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
fimU	Acinetobacter baumannii D1279779	85.35	100	0.854