Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   E3S90_RS06555 Genome accession   NZ_CP047790
Coordinates   1318050..1318724 (-) Length   224 a.a.
NCBI ID   WP_001166500.1    Uniprot ID   Q99VW2
Organism   Staphylococcus aureus strain UP_830     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1313050..1323724
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3S90_RS06540 (E3S90_06540) vraG 1314233..1316122 (-) 1890 WP_000143612.1 ABC transporter permease VraG -
  E3S90_RS06545 (E3S90_06545) vraF 1316112..1316873 (-) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  E3S90_RS06550 (E3S90_06550) graS 1317017..1318057 (-) 1041 WP_001061262.1 histidine kinase GraS/ApsS -
  E3S90_RS06555 (E3S90_06555) braR 1318050..1318724 (-) 675 WP_001166500.1 response regulator transcription factor GraR/ApsR Regulator
  E3S90_RS06560 (E3S90_06560) graX 1318740..1319663 (-) 924 WP_000802955.1 auxiliary protein GraX/ApsX -
  E3S90_RS06565 (E3S90_06565) - 1319776..1320282 (+) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  E3S90_RS06570 (E3S90_06570) - 1320491..1320919 (-) 429 WP_000198504.1 hypothetical protein -
  E3S90_RS06575 (E3S90_06575) - 1321248..1322291 (-) 1044 WP_001030771.1 alpha/beta hydrolase -
  E3S90_RS06580 (E3S90_06580) - 1322442..1323509 (-) 1068 WP_000980137.1 membrane protein -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 26065.87 Da        Isoelectric Point: 4.3563

>NTDB_id=362227 E3S90_RS06555 WP_001166500.1 1318050..1318724(-) (braR) [Staphylococcus aureus strain UP_830]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=362227 E3S90_RS06555 WP_001166500.1 1318050..1318724(-) (braR) [Staphylococcus aureus strain UP_830]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTTGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACAAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q99VW2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397


Multiple sequence alignment