Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   GALLO_RS11600 Genome accession   NC_013798
Coordinates   2350101..2350877 (+) Length   258 a.a.
NCBI ID   WP_009855222.1    Uniprot ID   A0AA36K0A4
Organism   Streptococcus gallolyticus UCN34     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2345101..2355877
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GALLO_RS11590 (GALLO_2260) rlmH 2348076..2348555 (-) 480 WP_009855220.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  GALLO_RS11595 (GALLO_2261) htrA 2348766..2350031 (+) 1266 WP_013643604.1 S1C family serine protease Regulator
  GALLO_RS11600 (GALLO_2262) spo0J 2350101..2350877 (+) 777 WP_009855222.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 258 a.a.        Molecular weight: 29712.54 Da        Isoelectric Point: 9.7762

>NTDB_id=36222 GALLO_RS11600 WP_009855222.1 2350101..2350877(+) (spo0J) [Streptococcus gallolyticus UCN34]
MPETLILIKIENISPNPYQPRLEFKQEELEELARSIKTNGLIQPIIVRESTVFGYELIAGERRLRASKMAGLTEIPAIIK
NISNQESMQLAIVENLQRSDLNPIEEAKAYQQLLEKNQMTHEELAQFMGKSRPYITNCLRLLNLPKSLSDAVEKGELSQG
HARVLLTLKNAEEQEKWYQKILTEDISVRKLEHLLKPAKKKKNRPKKKDIFIRNQEEELTKQLGLPVKIIVSKTGTKGEV
SLHFQSEEDLNRIINKLK

Nucleotide


Download         Length: 777 bp        

>NTDB_id=36222 GALLO_RS11600 WP_009855222.1 2350101..2350877(+) (spo0J) [Streptococcus gallolyticus UCN34]
ATGCCTGAAACACTCATATTAATCAAAATTGAAAATATCTCACCTAATCCCTACCAACCCCGTTTAGAATTTAAACAAGA
AGAGCTAGAAGAACTAGCACGTTCGATTAAAACTAATGGGCTTATTCAGCCGATTATCGTCCGAGAATCAACTGTCTTTG
GTTATGAGCTTATTGCCGGTGAAAGACGTCTAAGAGCCTCAAAAATGGCAGGTTTAACCGAAATTCCTGCTATCATAAAA
AATATCTCCAATCAGGAGAGCATGCAGCTGGCTATCGTTGAAAATTTGCAACGTTCTGATTTAAATCCAATCGAAGAAGC
AAAAGCTTACCAGCAACTTCTGGAAAAAAATCAAATGACCCATGAAGAATTAGCACAATTTATGGGAAAATCTCGCCCCT
ACATTACCAATTGCCTCAGATTACTTAACCTTCCTAAAAGTCTCTCTGATGCCGTTGAAAAAGGTGAGCTGTCTCAAGGA
CACGCGCGTGTTCTTTTAACCCTTAAAAATGCTGAAGAACAAGAAAAGTGGTATCAAAAAATTCTGACAGAGGATATTAG
CGTTAGAAAACTTGAACATTTACTAAAACCTGCTAAAAAGAAAAAAAATCGTCCCAAAAAGAAAGATATTTTCATTCGAA
ATCAAGAAGAAGAATTGACCAAACAGTTAGGACTTCCTGTTAAAATTATCGTCTCTAAAACTGGCACAAAAGGAGAGGTG
AGTTTACATTTTCAATCTGAAGAAGACTTAAACAGAATTATCAACAAGCTAAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

59.533

99.612

0.593


Multiple sequence alignment