Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | FDQ49_RS01585 | Genome accession | NZ_CP040105 |
| Coordinates | 343105..343485 (-) | Length | 126 a.a. |
| NCBI ID | WP_016804844.1 | Uniprot ID | - |
| Organism | Acinetobacter nosocomialis M2 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 338105..348485
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FDQ49_RS01555 (FDQ49_01555) | tadA | 338110..338613 (-) | 504 | WP_031945675.1 | tRNA adenosine(34) deaminase TadA | - |
| FDQ49_RS01560 (FDQ49_01560) | - | 338620..339744 (-) | 1125 | WP_006580787.1 | enoyl-CoA hydratase/isomerase family protein | - |
| FDQ49_RS01565 (FDQ49_01565) | ung | 339741..340454 (-) | 714 | WP_002049829.1 | uracil-DNA glycosylase | - |
| FDQ49_RS01570 (FDQ49_01570) | - | 340505..341101 (-) | 597 | WP_022574659.1 | 6-carboxytetrahydropterin synthase | - |
| FDQ49_RS01575 (FDQ49_01575) | gspK | 341331..342290 (-) | 960 | WP_022574660.1 | type II secretion system minor pseudopilin GspK | - |
| FDQ49_RS01580 (FDQ49_01580) | xcpW | 342290..343105 (-) | 816 | WP_022574661.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| FDQ49_RS01585 (FDQ49_01585) | xcpV | 343105..343485 (-) | 381 | WP_016804844.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| FDQ49_RS01590 (FDQ49_01590) | - | 343475..344026 (-) | 552 | WP_002049902.1 | type II secretion system protein | - |
| FDQ49_RS01595 (FDQ49_01595) | - | 344036..344644 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| FDQ49_RS01600 (FDQ49_01600) | - | 344682..345455 (-) | 774 | WP_022574662.1 | TatD family hydrolase | - |
| FDQ49_RS01605 (FDQ49_01605) | - | 345473..345814 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| FDQ49_RS01610 (FDQ49_01610) | - | 345827..346807 (-) | 981 | WP_022574663.1 | DNA polymerase III subunit delta' | - |
| FDQ49_RS01615 (FDQ49_01615) | kdsB | 346819..347580 (-) | 762 | WP_004887485.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13961.18 Da Isoelectric Point: 9.8004
>NTDB_id=362210 FDQ49_RS01585 WP_016804844.1 343105..343485(-) (xcpV) [Acinetobacter nosocomialis M2]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAESTVSPNVQKINVQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAESTVSPNVQKINVQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=362210 FDQ49_RS01585 WP_016804844.1 343105..343485(-) (xcpV) [Acinetobacter nosocomialis M2]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTAGCAGCTGTTGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCTACTTCTAATGCCATTTTAAGAACTAAAGCTCAATTTGTAGCTATGAATGAAATTG
CTATGATGGAAATTAATCAAGAGTGGTTGCAGGGCACTCAAAGTAAACAAGTAACTTCTCAAGGTGAGACTTGGCAGATT
GATAAATCAGCTGAATCAACTGTTAGCCCTAATGTTCAAAAAATTAATGTACAAGTTAGCTTATATGATCCGGATAAGGG
AAAAGTACAAAACGGTATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTAGCAGCTGTTGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCTACTTCTAATGCCATTTTAAGAACTAAAGCTCAATTTGTAGCTATGAATGAAATTG
CTATGATGGAAATTAATCAAGAGTGGTTGCAGGGCACTCAAAGTAAACAAGTAACTTCTCAAGGTGAGACTTGGCAGATT
GATAAATCAGCTGAATCAACTGTTAGCCCTAATGTTCAAAAAATTAATGTACAAGTTAGCTTATATGATCCGGATAAGGG
AAAAGTACAAAACGGTATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
96.032 |
100 |
0.96 |