Detailed information NTG0362209

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: FDQ49_RS01580
• Genome accession: NZ_CP040105
• Coordinates: 342290..343105 (-)
• Length: 271 a.a.
• NCBI ID: WP_022574661.1
• Uniprot ID: -
• Organism: Acinetobacter nosocomialis M2
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 337290..348105

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FDQ49_RS01550 (FDQ49_01550)	-	337600..338040 (-)	441	WP_002050033.1	SRPBCC family protein	-
FDQ49_RS01555 (FDQ49_01555)	tadA	338110..338613 (-)	504	WP_031945675.1	tRNA adenosine(34) deaminase TadA	-
FDQ49_RS01560 (FDQ49_01560)	-	338620..339744 (-)	1125	WP_006580787.1	enoyl-CoA hydratase/isomerase family protein	-
FDQ49_RS01565 (FDQ49_01565)	ung	339741..340454 (-)	714	WP_002049829.1	uracil-DNA glycosylase	-
FDQ49_RS01570 (FDQ49_01570)	-	340505..341101 (-)	597	WP_022574659.1	6-carboxytetrahydropterin synthase	-
FDQ49_RS01575 (FDQ49_01575)	gspK	341331..342290 (-)	960	WP_022574660.1	type II secretion system minor pseudopilin GspK	-
FDQ49_RS01580 (FDQ49_01580)	xcpW	342290..343105 (-)	816	WP_022574661.1	type II secretion system minor pseudopilin GspJ	Machinery gene
FDQ49_RS01585 (FDQ49_01585)	xcpV	343105..343485 (-)	381	WP_016804844.1	type II secretion system minor pseudopilin GspI	Machinery gene
FDQ49_RS01590 (FDQ49_01590)	-	343475..344026 (-)	552	WP_002049902.1	type II secretion system protein	-
FDQ49_RS01595 (FDQ49_01595)	-	344036..344644 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
FDQ49_RS01600 (FDQ49_01600)	-	344682..345455 (-)	774	WP_022574662.1	TatD family hydrolase	-
FDQ49_RS01605 (FDQ49_01605)	-	345473..345814 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
FDQ49_RS01610 (FDQ49_01610)	-	345827..346807 (-)	981	WP_022574663.1	DNA polymerase III subunit delta'	-
FDQ49_RS01615 (FDQ49_01615)	kdsB	346819..347580 (-)	762	WP_004887485.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30736.13 Da
• Isoelectric Point: 9.8922

>NTDB_id=362209 FDQ49_RS01580 WP_022574661.1 342290..343105(-) (xcpW) [Acinetobacter nosocomialis M2]
MIKNKNFRIQSIASHLRAQSGVIPTDYSGHSSSSYAQTKLRFREPHTRNMVSRLAARSSNARLTHTSGFTLVELLVAIAI
FAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQILRDSLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLK
LGLSPFERIEYRYDADQKKLYRLKYTNLNTSNNEQPLSSTLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKG
IKIQLTVAGVSYEWIYSLNQSNLSLSPQGGS

Nucleotide

• Length: 816 bp

>NTDB_id=362209 FDQ49_RS01580 WP_022574661.1 342290..343105(-) (xcpW) [Acinetobacter nosocomialis M2]
ATGATAAAAAATAAGAATTTTCGAATTCAAAGCATTGCTTCTCATCTTAGAGCTCAGTCGGGTGTTATTCCGACTGACTA
CTCTGGGCATAGCTCTTCGTCTTACGCTCAGACAAAGCTTCGCTTTAGAGAGCCTCACACTCGAAACATGGTTTCTCGTC
TTGCGGCGCGATCGAGCAATGCTCGATTAACTCACACCTCAGGATTTACGTTGGTTGAATTGTTAGTTGCGATTGCTATC
TTTGCGGTCTTATCTTTATTGGGGTGGAAAATTTTCGATTACTTGCTTAAAGTTCGTGACCGTAATGCTGAACATGAAGT
GCATTTGTTTGAGTTACAAGATGCTTATCAACAAATTCTTCGTGATAGTCTGCAAATTATTCCTTTATCTGCAAATCAAG
GTGGTCAACTTCATCCAGCTTTAGAAATTGATAATCAAATTCTGCGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAA
CTAGGTTTATCACCGTTTGAACGAATTGAATATCGTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAA
TTTGAATACTTCGAATAATGAGCAACCTTTATCGAGCACTTTGCTAAGTCAGGTTGACCAATATCAGATTATGGTTTTGA
CTCCGCAAGAGGTAACAAAGTGGCCTGAGGTTAATATTGATCCAACAAAGCCTAACGAATTGAAAAAATTACCGAAAGGA
ATAAAAATTCAACTTACTGTAGCAGGAGTAAGTTATGAATGGATCTATAGCTTAAATCAAAGTAATTTATCGCTTTCGCC
ACAAGGTGGCTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (67-87)

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	92.92	83.395	0.775