Detailed information NTG0361827

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: FDF20_RS16995
• Genome accession: NZ_CP040050
• Coordinates: 3497424..3498482 (-)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain VB16141
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3492424..3503482

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FDF20_RS16970 (FDF20_16970)	aroK	3492694..3493263 (-)	570	WP_000643712.1	shikimate kinase AroK	-
FDF20_RS16975 (FDF20_16975)	pilQ	3493275..3495440 (-)	2166	WP_001017033.1	type IV pilus secretin PilQ family protein	Machinery gene
FDF20_RS16980 (FDF20_16980)	pilP	3495508..3496035 (-)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
FDF20_RS16985 (FDF20_16985)	pilO	3496046..3496786 (-)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
FDF20_RS16990 (FDF20_16990)	pilN	3496783..3497424 (-)	642	WP_000201227.1	PilN domain-containing protein	Machinery gene
FDF20_RS16995 (FDF20_16995)	pilM	3497424..3498482 (-)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
FDF20_RS17000 (FDF20_17000)	ponA	3498645..3501200 (+)	2556	WP_000736670.1	penicillin-binding protein PBP1a	-
FDF20_RS17005 (FDF20_17005)	-	3501184..3502041 (-)	858	WP_171467136.1	putative RNA methyltransferase	-
FDF20_RS17010 (FDF20_17010)	-	3502044..3502376 (-)	333	WP_000169594.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=361827 FDF20_RS16995 WP_002014066.1 3497424..3498482(-) (pilM) [Acinetobacter baumannii strain VB16141]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=361827 FDF20_RS16995 WP_002014066.1 3497424..3498482(-) (pilM) [Acinetobacter baumannii strain VB16141]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCCGATCGTCTTG
CGAATCCAAATCGTGTAAATGTACTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTCTTTGGTGGCAAGCAACTTACGCTTGAAATTCAAAGTCGTTATGGCTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTAGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423