Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | FDF20_RS16980 | Genome accession | NZ_CP040050 |
| Coordinates | 3495508..3496035 (-) | Length | 175 a.a. |
| NCBI ID | WP_000695065.1 | Uniprot ID | N9K1N5 |
| Organism | Acinetobacter baumannii strain VB16141 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3490508..3501035
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FDF20_RS16960 (FDF20_16960) | - | 3490692..3491567 (-) | 876 | WP_000218802.1 | hypothetical protein | - |
| FDF20_RS16965 (FDF20_16965) | aroB | 3491583..3492665 (-) | 1083 | WP_001193997.1 | 3-dehydroquinate synthase | - |
| FDF20_RS16970 (FDF20_16970) | aroK | 3492694..3493263 (-) | 570 | WP_000643712.1 | shikimate kinase AroK | - |
| FDF20_RS16975 (FDF20_16975) | pilQ | 3493275..3495440 (-) | 2166 | WP_001017033.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| FDF20_RS16980 (FDF20_16980) | pilP | 3495508..3496035 (-) | 528 | WP_000695065.1 | pilus assembly protein PilP | Machinery gene |
| FDF20_RS16985 (FDF20_16985) | pilO | 3496046..3496786 (-) | 741 | WP_000076101.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| FDF20_RS16990 (FDF20_16990) | pilN | 3496783..3497424 (-) | 642 | WP_000201227.1 | PilN domain-containing protein | Machinery gene |
| FDF20_RS16995 (FDF20_16995) | pilM | 3497424..3498482 (-) | 1059 | WP_002014066.1 | pilus assembly protein PilM | Machinery gene |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19419.64 Da Isoelectric Point: 8.9898
>NTDB_id=361824 FDF20_RS16980 WP_000695065.1 3495508..3496035(-) (pilP) [Acinetobacter baumannii strain VB16141]
MKIKQITLYVLACAVLVGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
MKIKQITLYVLACAVLVGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=361824 FDF20_RS16980 WP_000695065.1 3495508..3496035(-) (pilP) [Acinetobacter baumannii strain VB16141]
ATGAAAATTAAGCAAATTACTCTTTATGTTTTGGCGTGTGCTGTGCTTGTCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTAGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTCGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCCTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GCATGAATCAGGGCCGTATTACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCAGATGGTCGAGAAGGC
TATGTCGAAAGACCAAGAACATTGGTCTTGATTGGGCCTGCACCCTAA
ATGAAAATTAAGCAAATTACTCTTTATGTTTTGGCGTGTGCTGTGCTTGTCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTAGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTCGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCCTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GCATGAATCAGGGCCGTATTACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCAGATGGTCGAGAAGGC
TATGTCGAAAGACCAAGAACATTGGTCTTGATTGGGCCTGCACCCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |
| comL | Acinetobacter baylyi ADP1 |
71.839 |
99.429 |
0.714 |