Detailed information NTG0361165

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: FCJ76_RS19315
• Genome accession: NZ_CP039935
• Coordinates: 3705781..3706926 (+)
• Length: 381 a.a.
• NCBI ID: WP_134982264.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain H19
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3700781..3711926

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FCJ76_RS19290	albF	3700796..3702076 (+)	1281	WP_086344438.1	pitrilysin family protein	-
FCJ76_RS19295	albG	3702073..3702774 (+)	702	WP_003243391.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
FCJ76_RS19300	ywhL	3702780..3704156 (-)	1377	WP_086344439.1	YncE family protein	-
FCJ76_RS19305	ywhK	3704196..3705551 (-)	1356	WP_137201081.1	YncE family protein	-
FCJ76_RS21585	-	3705548..3705778 (-)	231	WP_024572000.1	hypothetical protein	-
FCJ76_RS19315	rapF	3705781..3706926 (+)	1146	WP_134982264.1	response regulator aspartate phosphatase RapF	Regulator
FCJ76_RS19320	phrF	3706910..3707029 (+)	120	WP_041334633.1	phosphatase RapF inhibitor PhrF	Regulator
FCJ76_RS19325	-	3707127..3707589 (+)	463	Protein_3723	YbaK/EbsC family protein	-
FCJ76_RS19330	speB	3707621..3708493 (-)	873	WP_003227545.1	agmatinase	-
FCJ76_RS19335	speE	3708554..3709384 (-)	831	WP_003227543.1	spermidine synthase	-
FCJ76_RS19340	pbpG	3709586..3711661 (+)	2076	WP_015384942.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45659.17 Da
• Isoelectric Point: 5.1503

>NTDB_id=361165 FCJ76_RS19315 WP_134982264.1 3705781..3706926(+) (rapF) [Bacillus subtilis strain H19]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKVHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=361165 FCJ76_RS19315 WP_134982264.1 3705781..3706926(+) (rapF) [Bacillus subtilis strain H19]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAAGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGTTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_8) (223-250)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.213	100	0.992
rapC	Bacillus subtilis subsp. subtilis str. 168	57.105	99.738	0.57