Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   FCJ76_RS16300 Genome accession   NZ_CP039935
Coordinates   3110044..3112356 (-) Length   770 a.a.
NCBI ID   WP_099085219.1    Uniprot ID   -
Organism   Bacillus subtilis strain H19     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3105044..3117356
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FCJ76_RS16260 mrpB 3105511..3105942 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  FCJ76_RS16265 mrpC 3105942..3106283 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  FCJ76_RS16270 mrpD 3106276..3107757 (+) 1482 WP_128738179.1 Na+/H+ antiporter subunit D -
  FCJ76_RS16275 mrpE 3107763..3108239 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  FCJ76_RS16280 mrpF 3108239..3108523 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  FCJ76_RS16285 mnhG 3108507..3108881 (+) 375 WP_128738180.1 monovalent cation/H(+) antiporter subunit G -
  FCJ76_RS16290 yuxO 3108920..3109300 (-) 381 WP_071579112.1 hotdog fold thioesterase -
  FCJ76_RS16295 comA 3109319..3109963 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  FCJ76_RS16300 comP 3110044..3112356 (-) 2313 WP_099085219.1 histidine kinase Regulator
  FCJ76_RS16305 comX 3112372..3112593 (-) 222 WP_134982027.1 competence pheromone ComX -
  FCJ76_RS16310 - 3112590..3113459 (-) 870 WP_095843911.1 polyprenyl synthetase family protein -
  FCJ76_RS16315 degQ 3113644..3113784 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  FCJ76_RS16320 - 3114006..3114131 (+) 126 WP_128473219.1 hypothetical protein -
  FCJ76_RS16325 - 3114247..3114615 (+) 369 WP_017695529.1 hypothetical protein -
  FCJ76_RS16330 pdeH 3114591..3115820 (-) 1230 WP_024572553.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89319.34 Da        Isoelectric Point: 8.3117

>NTDB_id=361155 FCJ76_RS16300 WP_099085219.1 3110044..3112356(-) (comP) [Bacillus subtilis strain H19]
MHRNNNFYKYLSLAFIILSFVYVIYLSYISVFNIFVGADVKINEQGKLEVTKVVDYTDEYYSGVKKGDIILEVNGQKGSE
IQLESGRLVNVESLTVERDNKSFHLQNVSLISEENLFMYLIPLISYSICLFCIFFVYRINKVRKSPSAFVLILFLLFVSV
AYVSACGARRGEEVSTYLLVLTLVSCPILYIHFIYKYFAELGTKLFKKKILIIMYILPLVNLLLEAVLSNRLNSSAFLSN
LNLISFFVLVLTVSILIHQGIRKIKQNEQKSILKILAYINILSFSPFIIFFVIPYVLFDKYLSPFSLAAFTLVIPFSLVY
QFMTNRLYNIDFVVGRLKYYGFLAITPTVIVVTIFNYIQKPEDNFYSVKLTVVIYLLMFAVFYFKEIIDFRFKLKRFTEK
FNYQDGIFKFTQLIKQASSVDQVLNHFKNTILEVLNIDNACVYDNSKGEITLLSKNNFKDLTYKNHEQYVKNFSGDIGKI
KEFKQGFIIKIGERGDRSFLVLCFSSYNTFKLTRDEIAWLQTLAFYTNVSLENVMKIEELMVHLEDLKQQESNPVWLKKL
MYTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKGDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLY
DLGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDD
GVGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=361155 FCJ76_RS16300 WP_099085219.1 3110044..3112356(-) (comP) [Bacillus subtilis strain H19]
ATGCACAGAAATAATAACTTCTATAAATATTTGTCTCTAGCTTTTATCATTTTAAGTTTTGTTTATGTGATCTACCTCTC
TTATATTTCTGTTTTTAATATCTTTGTAGGTGCGGATGTGAAGATTAATGAACAGGGTAAGTTAGAGGTTACCAAAGTTG
TGGATTATACAGATGAATATTATTCGGGTGTAAAAAAGGGTGACATCATTCTCGAAGTTAATGGGCAAAAAGGAAGTGAA
ATCCAGTTAGAAAGCGGAAGATTGGTCAATGTAGAAAGCTTAACTGTTGAAAGAGATAATAAATCATTTCATTTACAAAA
TGTAAGCCTAATAAGTGAAGAAAATTTATTTATGTATCTCATTCCGCTCATATCTTATTCAATCTGTTTATTTTGTATAT
TTTTTGTTTACAGAATAAATAAAGTAAGAAAATCACCTTCTGCTTTTGTTTTAATCTTATTTTTGTTATTTGTATCAGTA
GCATATGTAAGTGCCTGCGGGGCAAGAAGAGGTGAAGAGGTTAGCACTTATCTACTTGTCCTTACTTTAGTAAGTTGTCC
AATTTTATATATACATTTCATATATAAATACTTTGCGGAATTGGGTACAAAGTTATTCAAAAAGAAGATTTTAATCATTA
TGTATATACTTCCACTCGTAAACCTGTTACTAGAAGCTGTTTTGAGTAATAGATTAAATTCTTCGGCTTTTTTGTCAAAC
TTGAACTTGATTTCCTTTTTTGTCCTAGTCCTTACTGTATCTATTCTTATCCATCAAGGGATTAGAAAAATCAAACAAAA
TGAGCAAAAGTCAATTTTAAAAATCCTTGCTTATATAAATATCCTGTCTTTTAGTCCTTTTATTATCTTTTTTGTTATTC
CCTATGTGTTGTTTGATAAGTATCTTTCACCCTTTAGTTTGGCAGCTTTTACACTTGTTATACCTTTTTCTTTAGTGTAT
CAATTTATGACAAATAGACTTTATAATATTGACTTTGTTGTAGGACGGCTTAAATACTATGGATTTTTAGCCATTACACC
TACTGTTATTGTGGTCACCATATTTAATTACATTCAAAAACCAGAAGATAACTTTTACTCCGTTAAACTAACAGTTGTAA
TATATTTGCTTATGTTTGCTGTCTTTTACTTTAAAGAAATCATTGATTTTCGTTTCAAGTTGAAAAGATTTACAGAGAAA
TTTAATTATCAAGATGGGATTTTTAAATTTACTCAGTTGATTAAGCAAGCATCATCAGTAGATCAAGTACTTAATCACTT
TAAAAATACAATCCTAGAAGTATTAAACATAGATAATGCTTGCGTGTATGATAATTCTAAAGGGGAAATCACCCTTCTTA
GTAAGAACAACTTTAAAGATTTGACTTATAAAAATCATGAGCAATATGTGAAAAATTTTTCTGGTGATATCGGTAAAATT
AAAGAGTTTAAACAAGGTTTTATTATTAAAATAGGTGAACGAGGAGACAGATCATTTTTAGTACTCTGTTTCTCAAGTTA
TAATACTTTTAAATTAACAAGGGATGAAATTGCATGGCTTCAAACATTAGCGTTTTATACAAATGTCTCATTGGAAAACG
TTATGAAAATCGAAGAATTGATGGTGCATCTTGAGGATTTAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTC
ATGTACACGATCGAGGAAAAACAACGCTCGGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTT
AAAACGCCAGTGTGAGCTGTTTTTGGGTGATTTTAAGAAGGGTGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTG
TACAGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTAT
GATCTTGGATTGGTGAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATAC
CGGGAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGG
TCAAGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGATGAT
GGCGTAGGGTTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGC
TTTAGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

56.047

99.87

0.56


Multiple sequence alignment