Detailed information
Bioinformatically predicted
Overview
| Name | pilK | Type | Machinery gene |
| Locus tag | FAH66_RS04950 | Genome accession | NZ_CP039887 |
| Coordinates | 1015099..1015644 (+) | Length | 181 a.a. |
| NCBI ID | WP_137040873.1 | Uniprot ID | A0A4D7WGV0 |
| Organism | Neisseria subflava strain ATCC 49275 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1010099..1020644
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FAH66_RS04925 (FAH66_04925) | - | 1010817..1011398 (-) | 582 | WP_070460856.1 | superoxide dismutase | - |
| FAH66_RS04930 (FAH66_04930) | dnaB | 1011553..1012959 (+) | 1407 | WP_063075500.1 | replicative DNA helicase | - |
| FAH66_RS04935 (FAH66_04935) | pilH | 1013117..1013812 (+) | 696 | WP_137040872.1 | GspH/FimT family pseudopilin | Machinery gene |
| FAH66_RS04940 (FAH66_04940) | pilV | 1013828..1014478 (+) | 651 | WP_208648089.1 | type IV pilus modification protein PilV | - |
| FAH66_RS04945 (FAH66_04945) | - | 1014481..1015120 (+) | 640 | Protein_947 | hypothetical protein | - |
| FAH66_RS04950 (FAH66_04950) | pilK | 1015099..1015644 (+) | 546 | WP_137040873.1 | pilus assembly protein | Machinery gene |
| FAH66_RS04955 (FAH66_04955) | - | 1015649..1016137 (+) | 489 | WP_137040874.1 | PilX family type IV pilin | - |
| FAH66_RS04960 (FAH66_04960) | - | 1016191..1016811 (-) | 621 | WP_137040875.1 | Smr/MutS family protein | - |
| FAH66_RS04965 (FAH66_04965) | - | 1016948..1017325 (+) | 378 | WP_137040876.1 | hypothetical protein | - |
| FAH66_RS04970 (FAH66_04970) | trpE | 1017461..1018936 (+) | 1476 | WP_137040877.1 | anthranilate synthase component I | - |
| FAH66_RS04975 (FAH66_04975) | - | 1018933..1019478 (+) | 546 | WP_137040878.1 | DUF1643 domain-containing protein | - |
| FAH66_RS04980 (FAH66_04980) | - | 1019475..1020611 (+) | 1137 | WP_137040879.1 | 5-(carboxyamino)imidazole ribonucleotide synthase | - |
Sequence
Protein
Download Length: 181 a.a. Molecular weight: 20166.02 Da Isoelectric Point: 8.4501
>NTDB_id=360940 FAH66_RS04950 WP_137040873.1 1015099..1015644(+) (pilK) [Neisseria subflava strain ATCC 49275]
MRRPITLIKPDRQQGYALFIVLMMMVVIALLVVTATQSYNTEQRISTNDADRKLATTLAEAALREGENQIFDIEGKKTTF
TAECTKGLCSTPNVKSNGDFTEEGNPTVDAWKRKCDKSLCIDANGTEYPLDKKSGIVNNPRYIIEYLGKTTEGRITYRVT
AKAWGKNANTQVVLQSYVASE
MRRPITLIKPDRQQGYALFIVLMMMVVIALLVVTATQSYNTEQRISTNDADRKLATTLAEAALREGENQIFDIEGKKTTF
TAECTKGLCSTPNVKSNGDFTEEGNPTVDAWKRKCDKSLCIDANGTEYPLDKKSGIVNNPRYIIEYLGKTTEGRITYRVT
AKAWGKNANTQVVLQSYVASE
Nucleotide
Download Length: 546 bp
>NTDB_id=360940 FAH66_RS04950 WP_137040873.1 1015099..1015644(+) (pilK) [Neisseria subflava strain ATCC 49275]
ATGCGCCGACCGATCACTCTAATCAAACCTGACCGGCAGCAGGGCTATGCTTTGTTTATCGTCTTAATGATGATGGTCGT
CATCGCCCTGCTCGTGGTTACAGCCACCCAGTCCTACAATACCGAACAGCGTATCAGTACCAATGATGCCGACCGTAAAC
TGGCAACCACCCTAGCCGAAGCGGCACTGCGTGAAGGTGAAAATCAAATTTTTGATATTGAAGGTAAAAAGACTACTTTT
ACTGCAGAATGTACAAAAGGTTTATGTTCCACACCAAACGTAAAATCCAATGGCGATTTTACTGAAGAAGGCAACCCAAC
CGTAGATGCTTGGAAGCGCAAATGCGACAAAAGCCTGTGTATTGACGCCAATGGTACGGAATATCCTTTAGATAAAAAAA
GTGGCATCGTAAATAATCCACGCTACATCATCGAATATTTAGGTAAAACGACAGAGGGTCGAATTACTTACCGCGTTACC
GCCAAAGCATGGGGTAAGAATGCCAATACCCAAGTCGTTCTTCAGTCTTACGTTGCCAGCGAATAA
ATGCGCCGACCGATCACTCTAATCAAACCTGACCGGCAGCAGGGCTATGCTTTGTTTATCGTCTTAATGATGATGGTCGT
CATCGCCCTGCTCGTGGTTACAGCCACCCAGTCCTACAATACCGAACAGCGTATCAGTACCAATGATGCCGACCGTAAAC
TGGCAACCACCCTAGCCGAAGCGGCACTGCGTGAAGGTGAAAATCAAATTTTTGATATTGAAGGTAAAAAGACTACTTTT
ACTGCAGAATGTACAAAAGGTTTATGTTCCACACCAAACGTAAAATCCAATGGCGATTTTACTGAAGAAGGCAACCCAAC
CGTAGATGCTTGGAAGCGCAAATGCGACAAAAGCCTGTGTATTGACGCCAATGGTACGGAATATCCTTTAGATAAAAAAA
GTGGCATCGTAAATAATCCACGCTACATCATCGAATATTTAGGTAAAACGACAGAGGGTCGAATTACTTACCGCGTTACC
GCCAAAGCATGGGGTAAGAATGCCAATACCCAAGTCGTTCTTCAGTCTTACGTTGCCAGCGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilK | Neisseria gonorrhoeae MS11 |
55.941 |
100 |
0.624 |