Detailed information    

insolico Bioinformatically predicted

Overview

Name   recC   Type   Machinery gene
Locus tag   FAH67_RS00755 Genome accession   NZ_CP039886
Coordinates   137182..140481 (+) Length   1099 a.a.
NCBI ID   WP_003682067.1    Uniprot ID   C0EQL5
Organism   Neisseria flavescens strain ATCC 13120     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 132182..145481
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FAH67_RS00730 (FAH67_00730) comM 132537..134033 (-) 1497 WP_003682057.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  FAH67_RS00735 (FAH67_00735) - 134047..134367 (-) 321 WP_003682060.1 accessory factor UbiK family protein -
  FAH67_RS00740 (FAH67_00740) metK 134477..135646 (-) 1170 WP_003682062.1 methionine adenosyltransferase -
  FAH67_RS00750 (FAH67_00750) - 136039..136914 (+) 876 WP_003682066.1 lysophospholipid acyltransferase family protein -
  FAH67_RS00755 (FAH67_00755) recC 137182..140481 (+) 3300 WP_003682067.1 exodeoxyribonuclease V subunit gamma Machinery gene
  FAH67_RS00760 (FAH67_00760) - 140485..140991 (+) 507 WP_003682068.1 thioredoxin family protein -
  FAH67_RS00765 (FAH67_00765) lapB 141106..142275 (-) 1170 WP_039864322.1 lipopolysaccharide assembly protein LapB -
  FAH67_RS00770 (FAH67_00770) - 142286..142600 (-) 315 WP_003682072.1 lipopolysaccharide assembly protein LapA domain-containing protein -
  FAH67_RS00780 (FAH67_00780) - 142721..143689 (+) 969 WP_172459139.1 choline/ethanolamine kinase family protein -
  FAH67_RS00785 (FAH67_00785) - 143689..144567 (+) 879 WP_003682075.1 DMT family transporter -
  FAH67_RS00790 (FAH67_00790) - 144564..145292 (+) 729 WP_003682077.1 NTP transferase domain-containing protein -

Sequence

Protein


Download         Length: 1099 a.a.        Molecular weight: 124687.22 Da        Isoelectric Point: 4.6840

>NTDB_id=360883 FAH67_RS00755 WP_003682067.1 137182..140481(+) (recC) [Neisseria flavescens strain ATCC 13120]
MFYLFQSDRLESLAEMCARIHQASPLDSVLAQEEVVVQSQGMRRYLNVFFARELGVAANLKFSLPAGLAWQLMRKLVPDV
PPLSPFSPEVMRWRLLDLFRSEVFQTAPEYENVRLKLESYLHSSASADYQLAGQMADIFDQYLVYRPDWIDAWQAGKLLG
LGDDEDWQARLWRYLDDGSQSAPHRVALWEKLLAQLDKSVLPQRFFVFGISTIAPMYLQLLHQISKHCDVFVFALNPSSQ
YWGEVIDEAQILKRGDEADLSQAGHPLLASLGKQGRDFFDFLSEVETEQDIQVYEEGKDDTLLHCLQNDIQKLIMPSERL
YQQEEGEVGVQSALVQVHDADGNPVCVEPDKLLNDGSVKIVAAHSPLRELQILKEELSLVLQNNPDWQPHDIAVLTPNIE
PYSPFIEAVFGQAHAGSQALPYSISDVKLSRRQPLLYALAQTLDLLESRFEVDKVLPLLESRLVLQRFGLSEEDVPLLHE
TVAGLNVHWGLDQTMRDGKDNLFTWQQAVERLALGWMLPEGGNGMWQGVSAWHSNVNQLDVFSGFAEFVRTLADMAAQWQ
EPANVESWVQRCHDLLEKLFAPDTDDQYAKQQFEQALAKWQEEAQLAEFDGLLPCKTVIRHIRRFLDSESQAGFLSGGIT
FCSMVPMRSLPFKMVCLLGLNDGDFPRNTKAAVFDLIAKHPKKGDRARRDDDRYLFLEALISARDMLYLSYIGRDIRNDA
EFAPSSLISELLDTIAAMTGKSGRELSEKWVKHHPLQAFSRRYFQKDALSDGLFSARQDYADALNQPQAEAQPFFLEALS
QEEPGKTIHQGELVSFWRNPVKVWLKKNLSWGQPYLDGAWESAEPFEPQHEGRIADAYLDARRKGEDFEDTAIRLNAESL
MPVGELGGLWQKQYQVSAKNVDAELIRSDKRPSEPYEESFDDLVLQGTIGNLYECGRIVFLNQKDNAPNRIARLLEHLIF
CAVAPKSVANRQTHIVSLGQTETYAAIGQQTAKELLKEWLVYFRIGQNTPLPFFAKTSLAAAEEYNKKEDWDAALRKAHD
VFNGNKMSKGQKEYTEVKLVFGHSEESPLDEPLFENLVVNLLVPLLNGVAGKTDTTEQE

Nucleotide


Download         Length: 3300 bp        

>NTDB_id=360883 FAH67_RS00755 WP_003682067.1 137182..140481(+) (recC) [Neisseria flavescens strain ATCC 13120]
ATGTTTTATCTCTTTCAATCCGACCGTTTGGAATCGCTTGCCGAAATGTGTGCGCGTATTCATCAGGCTTCGCCCTTGGA
TTCTGTATTGGCGCAGGAAGAAGTGGTGGTGCAGAGCCAGGGGATGCGGCGTTATCTGAATGTGTTTTTCGCGCGCGAAC
TCGGCGTGGCGGCGAATTTGAAGTTCAGCCTGCCTGCCGGTTTGGCGTGGCAGCTGATGCGCAAATTGGTTCCCGATGTG
CCGCCGCTCAGTCCGTTTTCGCCTGAAGTCATGCGTTGGCGTTTGCTGGATTTGTTCCGCAGCGAAGTGTTTCAGACAGC
ACCGGAATACGAAAACGTGCGCCTGAAGCTGGAAAGTTATTTGCACAGCTCGGCATCGGCGGATTATCAGCTTGCCGGAC
AGATGGCGGATATTTTCGACCAATATTTGGTGTACCGCCCGGATTGGATTGATGCGTGGCAGGCTGGGAAGCTGCTGGGT
TTGGGCGATGATGAGGATTGGCAGGCGCGGCTGTGGCGTTATTTAGACGATGGCAGCCAATCTGCGCCGCACCGCGTGGC
CTTGTGGGAAAAGCTGTTGGCGCAGTTGGATAAATCGGTCTTGCCGCAAAGGTTTTTTGTATTCGGTATTTCGACAATAG
CGCCGATGTATTTGCAACTACTGCACCAAATTTCCAAGCATTGCGATGTGTTTGTGTTTGCGCTCAACCCGAGCAGCCAA
TATTGGGGCGAGGTCATCGACGAGGCGCAGATTTTGAAAAGGGGCGATGAGGCGGATTTGTCGCAGGCAGGGCATCCGCT
GTTGGCTTCTTTAGGCAAGCAGGGGCGCGATTTCTTTGATTTTCTGTCGGAAGTGGAAACCGAACAGGATATTCAGGTTT
ATGAAGAGGGAAAAGACGATACCTTGTTGCATTGCCTGCAAAACGATATCCAAAAGTTAATCATGCCGTCTGAACGCTTG
TATCAACAGGAAGAAGGTGAAGTAGGCGTGCAGTCGGCTTTGGTTCAGGTTCACGATGCGGACGGCAATCCAGTGTGTGT
CGAGCCGGACAAACTGTTGAATGACGGCTCCGTCAAAATCGTCGCAGCACACAGCCCTTTGCGCGAATTGCAGATTTTGA
AAGAAGAGCTGTCGCTGGTGTTGCAAAATAATCCCGACTGGCAGCCGCACGATATTGCCGTGTTGACACCGAACATCGAG
CCGTACAGCCCGTTTATCGAAGCCGTTTTTGGACAGGCGCATGCAGGCAGCCAGGCTTTGCCGTATTCGATTTCGGATGT
GAAGCTCAGCCGCCGCCAGCCGTTACTGTATGCTTTGGCGCAAACTTTGGACTTGCTGGAAAGTCGGTTTGAAGTGGACA
AGGTGCTGCCTTTGCTGGAAAGCCGGTTGGTGCTGCAACGTTTCGGTTTGAGCGAGGAAGATGTGCCGCTGCTGCATGAG
ACTGTTGCCGGATTGAATGTGCATTGGGGTTTGGACCAAACCATGCGCGACGGTAAAGACAACCTTTTTACTTGGCAGCA
GGCGGTAGAGCGCTTGGCCTTGGGCTGGATGCTGCCCGAAGGCGGCAACGGCATGTGGCAGGGCGTGAGCGCGTGGCATA
GCAACGTCAATCAGCTGGACGTGTTCAGCGGTTTTGCCGAATTTGTCCGTACTTTGGCCGATATGGCGGCGCAATGGCAA
GAGCCTGCCAATGTGGAAAGTTGGGTGCAGCGTTGCCACGATTTGCTGGAGAAACTGTTTGCTCCGGATACGGACGACCA
ATACGCCAAGCAGCAGTTTGAGCAGGCTTTGGCGAAATGGCAGGAAGAGGCGCAGTTGGCCGAATTTGACGGATTGTTGC
CGTGTAAAACCGTTATCCGCCATATCCGCCGCTTTTTGGACAGCGAAAGCCAAGCCGGATTTTTGAGCGGCGGTATCACT
TTTTGCAGTATGGTGCCGATGCGCAGCCTGCCGTTTAAAATGGTTTGCCTGTTGGGTTTGAATGACGGCGATTTTCCGCG
CAATACCAAAGCAGCGGTGTTTGACCTGATTGCCAAACATCCGAAAAAAGGCGACCGCGCCCGCCGCGACGACGACCGTT
ATCTCTTCCTCGAAGCCTTAATCAGTGCGCGAGACATGCTGTATTTGTCTTATATCGGCCGCGATATACGCAATGATGCC
GAGTTTGCGCCGTCCTCGTTAATCAGTGAGCTGCTGGATACCATTGCCGCCATGACGGGGAAAAGCGGACGCGAGTTGTC
AGAGAAATGGGTGAAACATCATCCTTTGCAGGCGTTCTCACGCCGTTATTTCCAAAAGGACGCGCTTTCAGACGGCCTCT
TCAGTGCGCGCCAAGATTACGCCGATGCGTTAAATCAACCGCAAGCGGAAGCGCAGCCGTTTTTCCTTGAGGCCTTAAGT
CAGGAAGAACCGGGCAAAACCATTCACCAGGGCGAGCTTGTCAGTTTTTGGCGTAACCCTGTCAAAGTTTGGCTGAAGAA
AAATTTAAGCTGGGGTCAGCCGTATCTGGACGGCGCATGGGAGTCTGCCGAACCGTTTGAGCCGCAACATGAAGGTCGGA
TTGCCGATGCCTATTTGGATGCGCGGCGCAAAGGGGAAGATTTTGAAGATACGGCCATTCGGCTGAATGCCGAAAGCCTG
ATGCCGGTAGGCGAATTGGGCGGTTTGTGGCAGAAGCAGTATCAAGTATCTGCGAAAAACGTGGATGCCGAGCTGATACG
TAGTGACAAAAGGCCGTCTGAACCTTATGAAGAATCCTTTGACGACTTGGTGTTACAAGGCACCATCGGCAATCTTTACG
AATGCGGCCGCATTGTGTTTCTAAACCAAAAAGACAATGCCCCCAACCGCATTGCCCGTTTGTTGGAGCATTTGATTTTT
TGTGCCGTCGCCCCTAAATCCGTTGCAAACCGACAAACCCATATTGTCAGCTTGGGGCAGACTGAAACCTATGCCGCCAT
CGGGCAACAAACAGCAAAAGAACTTTTGAAAGAATGGCTGGTATATTTCCGAATCGGACAAAATACCCCCTTGCCGTTTT
TTGCCAAAACCAGTCTTGCCGCTGCGGAAGAGTACAACAAGAAAGAGGATTGGGATGCTGCCTTGAGAAAAGCCCATGAT
GTTTTTAACGGCAATAAAATGAGCAAAGGGCAGAAGGAATATACCGAAGTGAAGCTGGTGTTTGGCCATTCGGAAGAATC
GCCTCTTGATGAGCCGCTATTTGAAAACCTCGTCGTCAATCTGCTTGTGCCGCTTTTGAACGGCGTGGCAGGGAAAACCG
ATACAACAGAACAGGAGTAA

Domains

Predicted by InterproScan.

RecC C-terminal domain (RecC_C)

(807-1024)

Exodeoxyribonuclease V, gamma subunit (Exonuc_V_gamma)

(2-312)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0EQL5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recC Neisseria gonorrhoeae strain FA1090

64.842

98.089

0.636

Multiple sequence alignment