Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   FAY30_RS16605 Genome accession   NZ_CP039727
Coordinates   3430953..3431744 (-) Length   263 a.a.
NCBI ID   WP_149870912.1    Uniprot ID   -
Organism   Bacillus sp. S3     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 3425953..3436744
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FAY30_RS16575 (FAY30_16575) yqiS 3426255..3427160 (-) 906 WP_149870908.1 phosphate butyryltransferase -
  FAY30_RS16580 (FAY30_16580) - 3427294..3429375 (-) 2082 WP_149870909.1 sigma-54 interaction domain-containing protein -
  FAY30_RS16585 (FAY30_16585) - 3429563..3429796 (+) 234 WP_149872753.1 DUF2627 domain-containing protein -
  FAY30_RS16595 (FAY30_16595) - 3429984..3430712 (-) 729 WP_149870910.1 glycerophosphodiester phosphodiesterase -
  FAY30_RS16600 (FAY30_16600) - 3430751..3430888 (+) 138 WP_149870911.1 YycC family protein -
  FAY30_RS16605 (FAY30_16605) spo0A 3430953..3431744 (-) 792 WP_149870912.1 sporulation transcription factor Spo0A Regulator
  FAY30_RS16610 (FAY30_16610) spoIVB 3432043..3433338 (-) 1296 WP_149870913.1 SpoIVB peptidase -
  FAY30_RS16615 (FAY30_16615) recN 3433460..3435148 (-) 1689 WP_149870914.1 DNA repair protein RecN Machinery gene
  FAY30_RS16620 (FAY30_16620) ahrC 3435165..3435614 (-) 450 WP_149870915.1 transcriptional regulator AhrC/ArgR -
  FAY30_RS16625 (FAY30_16625) - 3435761..3436603 (-) 843 WP_149870916.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 29229.64 Da        Isoelectric Point: 6.6103

>NTDB_id=360463 FAY30_RS16605 WP_149870912.1 3430953..3431744(-) (spo0A) [Bacillus sp. S3]
MKKIKVCVVDDNRELVGLLEDYISSQDDMEVVGIAHNGQECLDMLASTDPDVLVLDIIMPHLDGLAVLERLRELKKGSLP
NVIMLTAFGQEDVTKKAVELGASYFILKPFDMENLGSHIRQVSGNTNSFTRKAPTTSYRSQSEQKPKNLDASITSIIHEI
GVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMSK
AKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 792 bp        

>NTDB_id=360463 FAY30_RS16605 WP_149870912.1 3430953..3431744(-) (spo0A) [Bacillus sp. S3]
TTGAAGAAGATAAAGGTTTGTGTTGTGGATGATAATAGAGAGCTAGTTGGATTATTAGAGGACTATATTTCGTCCCAAGA
TGATATGGAAGTTGTTGGTATTGCTCATAATGGTCAAGAGTGCTTGGATATGTTAGCTTCAACTGACCCAGATGTACTTG
TATTAGATATTATTATGCCGCATCTTGACGGATTGGCAGTTCTCGAGCGATTACGCGAATTAAAAAAGGGCTCACTGCCA
AATGTCATTATGCTTACGGCTTTTGGGCAAGAAGATGTAACAAAAAAGGCCGTTGAACTTGGTGCTTCTTATTTTATCCT
AAAACCATTTGATATGGAGAACCTTGGCAGCCATATTAGACAAGTGAGCGGGAATACCAATTCATTTACTCGTAAGGCTC
CGACAACAAGTTACCGTTCCCAATCAGAACAAAAACCCAAAAATTTAGATGCCAGCATTACAAGCATCATTCATGAAATT
GGGGTTCCGGCACATATTAAAGGCTATTTATATTTACGTGAAGCTATTTCAATGGTCTATAACGATATAGAGCTTTTAGG
TTCGATCACAAAAGTATTATATCCAGATATCGCTAAAAAATATAACACGACCGCAAGCCGTGTTGAGCGTGCCATTCGTC
ATGCTATTGAAGTGGCATGGAGCCGCGGCAATATTGACTCCATTTCCTCCTTATTTGGCTATACAGTAAGTATGTCAAAG
GCGAAGCCAACAAATTCCGAGTTTATTGCCATGGTCGCTGATAAATTACGCCTTGAGCATAAGGCTTCTTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(153-256)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

82.397

100

0.837

Multiple sequence alignment