Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   FAY30_RS08275 Genome accession   NZ_CP039727
Coordinates   1724846..1725331 (-) Length   161 a.a.
NCBI ID   WP_149869426.1    Uniprot ID   -
Organism   Bacillus sp. S3     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1719846..1730331
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FAY30_RS08250 (FAY30_08250) - 1721250..1721723 (+) 474 WP_149869421.1 hypothetical protein -
  FAY30_RS08255 (FAY30_08255) - 1721890..1722768 (+) 879 WP_149869422.1 NAD(P)-dependent oxidoreductase -
  FAY30_RS08260 (FAY30_08260) - 1722854..1723033 (+) 180 WP_149869423.1 hypothetical protein -
  FAY30_RS08265 (FAY30_08265) - 1723086..1724240 (-) 1155 WP_149869424.1 aminotransferase A -
  FAY30_RS08270 (FAY30_08270) - 1724424..1724624 (-) 201 WP_149869425.1 hypothetical protein -
  FAY30_RS08275 (FAY30_08275) kre 1724846..1725331 (-) 486 WP_149869426.1 YkyB family protein Regulator
  FAY30_RS08280 (FAY30_08280) - 1725599..1727710 (+) 2112 WP_149869427.1 EAL domain-containing protein -
  FAY30_RS08285 (FAY30_08285) - 1727840..1728613 (-) 774 WP_317845700.1 metallophosphoesterase -
  FAY30_RS08290 (FAY30_08290) - 1728780..1729613 (-) 834 WP_223820926.1 C39 family peptidase -

Sequence

Protein


Download         Length: 161 a.a.        Molecular weight: 18396.10 Da        Isoelectric Point: 10.4987

>NTDB_id=360456 FAY30_RS08275 WP_149869426.1 1724846..1725331(-) (kre) [Bacillus sp. S3]
MKGEHTLNHDQKHPLKKISLTSENLAQAVFIVNRHAKTAPNPKYLYKLKQESLKKLINEGKARKIGLHFSQNPRNSQQQS
DVLVECGRYTFHIPPTKADFQDLPHLGKLDGSVRNPKATLSLTTAKTLLQTYTGITEFENHPPNKRTYQKPIFKKLGEHY
S

Nucleotide


Download         Length: 486 bp        

>NTDB_id=360456 FAY30_RS08275 WP_149869426.1 1724846..1725331(-) (kre) [Bacillus sp. S3]
ATGAAAGGAGAACATACGTTGAATCACGATCAGAAACATCCCCTAAAAAAAATAAGTCTAACCAGTGAAAACCTCGCACA
AGCTGTCTTTATCGTGAATCGCCATGCAAAAACAGCACCGAACCCCAAATATTTGTACAAATTGAAACAAGAATCACTAA
AAAAATTGATTAATGAGGGCAAGGCAAGAAAAATAGGTCTCCACTTTTCTCAAAATCCGCGCAATAGCCAACAGCAGTCC
GACGTGCTCGTTGAATGTGGAAGATATACCTTCCATATCCCACCAACAAAAGCGGATTTTCAGGATCTTCCGCATCTGGG
CAAATTAGATGGCAGTGTTAGAAATCCGAAGGCAACACTTTCACTTACAACGGCAAAAACATTGCTGCAAACCTACACCG
GAATAACTGAGTTTGAAAATCACCCACCGAACAAACGCACCTATCAAAAACCGATTTTCAAGAAATTAGGCGAGCATTAT
TCTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(22-135)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

63.265

91.304

0.578

Multiple sequence alignment