Detailed information NTG0360455

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: FAY30_RS08185
• Genome accession: NZ_CP039727
• Coordinates: 1704888..1707044 (-)
• Length: 718 a.a.
• NCBI ID: WP_149869409.1
• Uniprot ID: -
• Organism: Bacillus sp. S3
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1699888..1712044

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FAY30_RS08170 (FAY30_08170)	-	1700898..1702412 (-)	1515	WP_149869406.1	PAS domain-containing sensor histidine kinase	-
FAY30_RS08175 (FAY30_08175)	-	1702615..1703055 (+)	441	WP_149869407.1	MarR family winged helix-turn-helix transcriptional regulator	-
FAY30_RS08180 (FAY30_08180)	-	1703149..1704843 (+)	1695	WP_149869408.1	M3 family oligoendopeptidase	-
FAY30_RS08185 (FAY30_08185)	clpC	1704888..1707044 (-)	2157	WP_149869409.1	ATP-dependent Clp protease ATP-binding subunit	Regulator
FAY30_RS08190 (FAY30_08190)	-	1707235..1708284 (+)	1050	WP_149869410.1	GerAB/ArcD/ProY family transporter	-
FAY30_RS08195 (FAY30_08195)	-	1708318..1708929 (-)	612	WP_149869411.1	CPBP family intramembrane glutamic endopeptidase	-
FAY30_RS27495	-	1709074..1709193 (+)	120	WP_223820924.1	DUF6254 family protein	-
FAY30_RS08200 (FAY30_08200)	-	1709249..1709437 (-)	189	WP_149869412.1	YkvS family protein	-
FAY30_RS08205 (FAY30_08205)	-	1709691..1709885 (+)	195	WP_149869413.1	hypothetical protein	-
FAY30_RS08210 (FAY30_08210)	-	1709898..1710848 (+)	951	WP_149869414.1	AAA family ATPase	-
FAY30_RS08215 (FAY30_08215)	-	1710845..1712041 (+)	1197	WP_149869415.1	DUF58 domain-containing protein	-

Sequence

Protein

• Length: 718 a.a.
• Molecular weight: 80426.91 Da
• Isoelectric Point: 5.6983

>NTDB_id=360455 FAY30_RS08185 WP_149869409.1 1704888..1707044(-) (clpC) [Bacillus sp. S3]
MLCQRCNQNHANVQLSMNINGQRQEMKLCHACYKIEKQALGTNYGQHMNSFSNFPFDHLFMSNGYSQGPNMGEQQTPHSE
RKAAQGGFIDQFGRNLNIMAKAGLIDPVIGRDQEIKRVIEILNRRNKNNPVLIGEPGVGKTAIAEGLAIKIANGDVPGKL
RNKEVYLLDVASLVANTGIRGQFEERMKELISELQERKNIILFIDEIHLLVGAGSAEGSMDAGNILKPALARGELQVVGA
TTLKEYRQIEKDSALERRFQPVNVLEPTKEAAIEILVGLQKKYEDYHEVTYSDEAILACVQLSQRYIQDRFLPDKAIDLL
DEAGSKLNLSTDYKSNEQMETRLKEIAAEKNEALKHELYEKAASLRDEEAKLEKLLNKDIRDERPVVTVSHIQEIIEQKT
GIPVGKLQQDEQLKMKVLEDNLSQKVIGQEKAVRKVAKAIRRSRAGLKSKNRPIGSFLFVGPTGVGKTELTKTLAEELFG
SKDSMIRLDMSEYMEKHSVSKLIGSPPGYVGHDEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLTDSQG
RIVSFKDTVIIMTSNAGVGHKNIHVGFGTTEAVEEASILDSLGSFFKPEFLNRFDSIIEFNSLDQEHILTIVDLMVIELQ
ETLKEQNIELSISQESKETLAELGYHPAFGARPLRRVIQEQLEDKIADFILEVPDSKKLAAIVENGELKVISEGITVN

Nucleotide

• Length: 2157 bp

>NTDB_id=360455 FAY30_RS08185 WP_149869409.1 1704888..1707044(-) (clpC) [Bacillus sp. S3]
ATGCTATGTCAACGATGTAATCAAAACCATGCAAATGTGCAATTAAGTATGAATATTAACGGGCAGCGTCAAGAGATGAA
ACTCTGTCATGCATGTTACAAAATAGAAAAACAAGCCCTAGGTACAAACTATGGTCAACATATGAACTCATTTTCGAACT
TCCCGTTTGACCATCTTTTTATGTCAAATGGTTATTCACAGGGTCCAAATATGGGTGAACAGCAAACCCCCCATAGTGAG
AGAAAAGCGGCACAAGGCGGCTTTATTGATCAATTTGGACGAAATTTAAACATCATGGCAAAGGCAGGTTTAATTGATCC
TGTTATCGGACGAGATCAGGAAATAAAACGGGTGATTGAAATCCTCAACAGAAGGAATAAAAACAATCCTGTTTTAATTG
GTGAACCAGGAGTTGGTAAAACGGCCATTGCTGAAGGTCTTGCGATAAAAATCGCTAATGGGGATGTCCCAGGTAAATTG
CGCAATAAAGAGGTCTATTTGCTTGATGTCGCTTCTCTTGTTGCCAATACCGGTATCCGTGGTCAATTTGAGGAACGGAT
GAAAGAATTAATTTCAGAATTGCAGGAACGAAAAAATATCATTCTGTTTATCGATGAAATTCATTTGCTTGTTGGTGCAG
GTTCTGCAGAAGGCTCCATGGATGCGGGGAACATTTTAAAACCAGCCCTTGCACGAGGAGAATTACAAGTAGTTGGTGCA
ACAACATTAAAGGAATACCGGCAAATCGAAAAGGATTCCGCTCTTGAACGACGCTTCCAGCCGGTGAATGTACTGGAACC
GACGAAAGAGGCGGCAATTGAAATTTTAGTAGGACTTCAAAAGAAGTATGAGGATTACCATGAAGTCACTTATTCAGATG
AAGCCATTCTTGCCTGTGTTCAATTATCACAGCGCTATATTCAAGACCGCTTCTTACCTGACAAAGCCATCGACTTGCTT
GATGAGGCCGGGTCTAAATTAAATCTTTCTACTGATTATAAAAGTAATGAACAAATGGAAACCCGTCTAAAAGAGATAGC
AGCTGAAAAGAACGAGGCCCTCAAACATGAACTGTATGAAAAAGCAGCCAGTCTTAGAGATGAAGAGGCAAAATTGGAAA
AGTTATTAAATAAGGATATACGTGATGAAAGGCCTGTTGTTACTGTTTCTCATATTCAAGAAATTATTGAACAAAAAACG
GGTATCCCCGTCGGAAAGCTGCAGCAGGATGAACAGCTGAAAATGAAAGTATTAGAAGATAATTTAAGTCAGAAGGTCAT
CGGTCAGGAAAAAGCTGTAAGAAAAGTAGCAAAGGCGATTAGACGCAGCCGGGCCGGTTTAAAATCAAAAAACCGTCCAA
TTGGCTCCTTCCTGTTTGTCGGTCCAACAGGTGTCGGTAAAACGGAGCTTACCAAGACCCTTGCAGAAGAATTATTTGGG
TCCAAGGATTCCATGATACGTCTCGATATGAGTGAATATATGGAGAAACACAGCGTTTCTAAACTAATCGGTTCACCTCC
AGGCTATGTGGGCCATGACGAGGCAGGACAGTTGACAGAAAAAGTCCGCAGAAACCCGTATAGCATTATTCTTTTAGATG
AAATTGAAAAAGCACATCCTGACGTACAGCACATGTTCCTGCAAATTCTTGAAGATGGCCGCCTTACTGACAGCCAAGGA
AGAATTGTCAGCTTTAAGGATACGGTCATTATTATGACCAGTAATGCTGGCGTCGGCCACAAAAACATCCACGTTGGGTT
TGGCACAACAGAAGCAGTAGAAGAAGCAAGTATCCTTGACTCGCTTGGCAGCTTCTTTAAGCCTGAATTTTTGAATCGTT
TTGATAGTATTATTGAATTTAACTCATTAGATCAAGAACATATCTTAACGATTGTTGATTTAATGGTAATTGAATTACAA
GAAACCTTAAAAGAGCAAAATATCGAATTATCCATTTCACAGGAATCAAAAGAAACATTAGCTGAACTTGGCTACCACCC
TGCTTTTGGAGCTCGCCCGCTCCGCAGAGTCATTCAGGAACAACTGGAAGATAAAATTGCCGACTTTATTTTAGAAGTGC
CAGATTCAAAAAAATTAGCAGCAATTGTTGAAAATGGCGAGTTAAAAGTTATCTCCGAAGGCATAACTGTAAACTAA

Domains

Predicted by InterproScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (131-260)

• AAA domain (Cdc48 subfamily) (AAA_2) (452-617)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (623-692)

• AAA lid domain (AAA_lid_9) (269-367)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Lactococcus lactis subsp. cremoris KW2	60.194	100	0.604
clpE	Streptococcus mutans UA159	57.995	100	0.596
clpE	Streptococcus pneumoniae Rx1	57.514	100	0.586
clpE	Streptococcus pneumoniae D39	57.514	100	0.586
clpE	Streptococcus pneumoniae R6	57.514	100	0.586
clpE	Streptococcus pneumoniae TIGR4	57.514	100	0.586
clpC	Bacillus subtilis subsp. subtilis str. 168	53.51	89.276	0.478
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	46.739	89.694	0.419
clpC	Streptococcus thermophilus LMD-9	43.459	95.822	0.416
clpC	Streptococcus thermophilus LMG 18311	43.169	95.822	0.414
clpC	Streptococcus mutans UA159	46.635	86.908	0.405
clpC	Streptococcus pneumoniae TIGR4	45.899	88.301	0.405
clpC	Streptococcus pneumoniae Rx1	45.899	88.301	0.405
clpC	Streptococcus pneumoniae D39	45.899	88.301	0.405