Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   FAY30_RS07555 Genome accession   NZ_CP039727
Coordinates   1579669..1579872 (+) Length   67 a.a.
NCBI ID   WP_149869294.1    Uniprot ID   -
Organism   Bacillus sp. S3     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1574669..1584872
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FAY30_RS07535 (FAY30_07535) - 1576497..1576682 (-) 186 WP_149869290.1 YjzD family protein -
  FAY30_RS07540 (FAY30_07540) - 1576867..1577589 (+) 723 WP_149869291.1 hydrolase -
  FAY30_RS07545 (FAY30_07545) - 1577672..1578508 (+) 837 WP_149869292.1 hypothetical protein -
  FAY30_RS07550 (FAY30_07550) med 1578702..1579649 (+) 948 WP_149869293.1 BMP family ABC transporter substrate-binding protein Regulator
  FAY30_RS07555 (FAY30_07555) comZ 1579669..1579872 (+) 204 WP_149869294.1 ComZ family protein Regulator
  FAY30_RS07560 (FAY30_07560) - 1579891..1580181 (-) 291 WP_149869295.1 hypothetical protein -
  FAY30_RS07565 (FAY30_07565) - 1580390..1581322 (+) 933 WP_149869296.1 beta-ketoacyl-ACP synthase III -
  FAY30_RS07570 (FAY30_07570) fabF 1581370..1582608 (+) 1239 WP_149869297.1 beta-ketoacyl-ACP synthase II -
  FAY30_RS07575 (FAY30_07575) - 1582927..1583697 (+) 771 WP_149869298.1 DUF2268 domain-containing protein -

Sequence

Protein


Download         Length: 67 a.a.        Molecular weight: 7899.15 Da        Isoelectric Point: 4.3765

>NTDB_id=360450 FAY30_RS07555 WP_149869294.1 1579669..1579872(+) (comZ) [Bacillus sp. S3]
MNNQDKTLQFMQIAMKYLPEAKTQLDQSGVELSMELIEPFMNLFTKVMHEAYELGREDALTELEMRK

Nucleotide


Download         Length: 204 bp        

>NTDB_id=360450 FAY30_RS07555 WP_149869294.1 1579669..1579872(+) (comZ) [Bacillus sp. S3]
ATGAATAATCAAGATAAGACATTACAATTTATGCAGATTGCGATGAAATACCTGCCTGAAGCGAAAACCCAATTAGACCA
ATCTGGGGTTGAATTATCAATGGAATTAATTGAGCCATTTATGAACCTGTTTACAAAAGTAATGCATGAAGCCTATGAGC
TTGGCAGAGAAGATGCGTTAACTGAATTAGAAATGAGGAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(5-59)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

70.492

91.045

0.642

Multiple sequence alignment