Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   FAY30_RS07550 Genome accession   NZ_CP039727
Coordinates   1578702..1579649 (+) Length   315 a.a.
NCBI ID   WP_149869293.1    Uniprot ID   -
Organism   Bacillus sp. S3     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1573702..1584649
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FAY30_RS07530 (FAY30_07530) clpB 1573856..1576450 (+) 2595 WP_149869289.1 ATP-dependent chaperone ClpB -
  FAY30_RS07535 (FAY30_07535) - 1576497..1576682 (-) 186 WP_149869290.1 YjzD family protein -
  FAY30_RS07540 (FAY30_07540) - 1576867..1577589 (+) 723 WP_149869291.1 hydrolase -
  FAY30_RS07545 (FAY30_07545) - 1577672..1578508 (+) 837 WP_149869292.1 hypothetical protein -
  FAY30_RS07550 (FAY30_07550) med 1578702..1579649 (+) 948 WP_149869293.1 BMP family ABC transporter substrate-binding protein Regulator
  FAY30_RS07555 (FAY30_07555) comZ 1579669..1579872 (+) 204 WP_149869294.1 ComZ family protein Regulator
  FAY30_RS07560 (FAY30_07560) - 1579891..1580181 (-) 291 WP_149869295.1 hypothetical protein -
  FAY30_RS07565 (FAY30_07565) - 1580390..1581322 (+) 933 WP_149869296.1 beta-ketoacyl-ACP synthase III -
  FAY30_RS07570 (FAY30_07570) fabF 1581370..1582608 (+) 1239 WP_149869297.1 beta-ketoacyl-ACP synthase II -
  FAY30_RS07575 (FAY30_07575) - 1582927..1583697 (+) 771 WP_149869298.1 DUF2268 domain-containing protein -

Sequence

Protein


Download         Length: 315 a.a.        Molecular weight: 34972.68 Da        Isoelectric Point: 5.2253

>NTDB_id=360449 FAY30_RS07550 WP_149869293.1 1578702..1579649(+) (med) [Bacillus sp. S3]
MFNRLGIILLCLLLLGACGETKTTGNLQKVGLLVPETVNDQVWGTKGYKGMLKIQSKFNVDVFYKEGMNSQAVVERAVKE
FEQKGVNLIFGHGSEYAEYFNNISEDYPKIHFVSFNGDAKNPNTTSLNFKAHAMGFFGGMVAAHMSKTNKVGVLAAYEWQ
PEIEGFYQGAMAENNQTHVSIEYVGNWDDEKKATQLANQMLKQGVDVVYPAGDGFNVPVIEQVKEQGSYVIGYVSDQSDL
GESTVLTSTIQQVDTLYEKVAEQYNEGKLKAGNLSFDFQDNVISLGKFSPLVSKDFIGKMNLKIEQYKETGKLPK

Nucleotide


Download         Length: 948 bp        

>NTDB_id=360449 FAY30_RS07550 WP_149869293.1 1578702..1579649(+) (med) [Bacillus sp. S3]
ATGTTTAACCGGTTGGGAATCATTCTTTTATGTCTTCTTTTACTTGGGGCTTGCGGGGAAACAAAGACGACAGGCAATTT
ACAGAAGGTTGGCTTGTTAGTTCCTGAAACAGTAAATGACCAAGTATGGGGAACAAAAGGCTATAAGGGAATGTTAAAAA
TACAATCCAAATTTAATGTGGATGTATTTTATAAAGAAGGAATGAATTCACAGGCTGTTGTTGAACGAGCAGTGAAGGAA
TTTGAGCAAAAAGGGGTCAATCTGATCTTTGGACATGGTTCAGAGTATGCAGAATACTTTAATAATATTTCGGAAGACTA
TCCTAAAATTCACTTTGTCAGTTTTAATGGCGATGCAAAGAACCCAAACACAACAAGCCTGAACTTTAAGGCACATGCGA
TGGGCTTTTTTGGCGGCATGGTTGCGGCTCATATGTCTAAAACTAATAAAGTAGGAGTTTTAGCAGCATATGAATGGCAG
CCTGAAATTGAAGGTTTTTATCAAGGTGCGATGGCTGAAAATAATCAAACACATGTAAGTATAGAATACGTCGGAAATTG
GGATGATGAAAAAAAGGCTACTCAACTAGCCAATCAAATGTTGAAACAAGGTGTCGATGTTGTATACCCTGCCGGGGATG
GTTTTAATGTTCCTGTTATTGAACAGGTGAAGGAACAGGGATCCTATGTGATTGGCTATGTTTCAGACCAGTCTGACCTT
GGGGAATCAACTGTATTAACAAGCACTATTCAACAGGTCGATACATTATATGAAAAGGTTGCTGAACAATATAACGAGGG
GAAGTTAAAAGCAGGTAATCTTTCATTTGATTTTCAAGACAATGTCATTTCTCTAGGTAAATTTAGCCCGTTAGTTTCAA
AAGACTTTATAGGAAAAATGAATCTGAAAATTGAACAATATAAAGAAACAGGAAAATTACCCAAATAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(28-314)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

55.238

100

0.552

Multiple sequence alignment