Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | FAY30_RS00490 | Genome accession | NZ_CP039727 |
| Coordinates | 99342..101783 (+) | Length | 813 a.a. |
| NCBI ID | WP_149868081.1 | Uniprot ID | - |
| Organism | Bacillus sp. S3 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 94342..106783
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FAY30_RS00475 (FAY30_00475) | - | 97218..97679 (+) | 462 | WP_149868078.1 | CtsR family transcriptional regulator | - |
| FAY30_RS00480 (FAY30_00480) | - | 97705..98253 (+) | 549 | WP_149868079.1 | UvrB/UvrC motif-containing protein | - |
| FAY30_RS00485 (FAY30_00485) | - | 98255..99328 (+) | 1074 | WP_149868080.1 | protein arginine kinase | - |
| FAY30_RS00490 (FAY30_00490) | clpC | 99342..101783 (+) | 2442 | WP_149868081.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| FAY30_RS00495 (FAY30_00495) | radA | 101901..103283 (+) | 1383 | WP_149868082.1 | DNA repair protein RadA | Machinery gene |
| FAY30_RS00500 (FAY30_00500) | disA | 103287..104360 (+) | 1074 | WP_149868083.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| FAY30_RS00505 (FAY30_00505) | - | 104565..105653 (+) | 1089 | WP_149868084.1 | PIN/TRAM domain-containing protein | - |
| FAY30_RS00510 (FAY30_00510) | ispD | 105700..106392 (+) | 693 | WP_149868085.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
Sequence
Protein
Download Length: 813 a.a. Molecular weight: 90545.34 Da Isoelectric Point: 6.0829
>NTDB_id=360436 FAY30_RS00490 WP_149868081.1 99342..101783(+) (clpC) [Bacillus sp. S3]
MMFGRFTERAQKVLALAQEEAIRLGHNNIGTEHILLGLVREGEGIAAKALYGLGLGSEKIQKEVENLIGKGQETSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNDSSGHQGGASATANT
PTLDSLARDLTSIAREGSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIRVDEPTAEESVQILEGLRDRYEAHHRVSITDEAIKAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSYTTPPNLKELEVKLEEVRKEKDAAVQSQEFEKAASLRDTEQRLREQLEETKKTWKEKQGKENNEVTVEDIASVV
SSWTGVPVSKLAETETAKLLNLEEVLHSRIIGQEEAVKAVSKAVRRARAGLKDPKRPIGSFVFLGPTGVGKTELARALAE
AMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTVLIMTSNVGAEALKRNKYVGFNIQDGEQDYKDMKGKVMDELKKAFRPEFLNRIDEIIVFHALERKHLN
EIVTLLSDQLIKRLKEQDISLELTEAAREKISQEGYDPEYGARPLRRAIQKHIEDRLSEELLKGTLLTGQLAIIDVDNGE
FIVRMAEKTSLVK
MMFGRFTERAQKVLALAQEEAIRLGHNNIGTEHILLGLVREGEGIAAKALYGLGLGSEKIQKEVENLIGKGQETSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNDSSGHQGGASATANT
PTLDSLARDLTSIAREGSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIRVDEPTAEESVQILEGLRDRYEAHHRVSITDEAIKAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSYTTPPNLKELEVKLEEVRKEKDAAVQSQEFEKAASLRDTEQRLREQLEETKKTWKEKQGKENNEVTVEDIASVV
SSWTGVPVSKLAETETAKLLNLEEVLHSRIIGQEEAVKAVSKAVRRARAGLKDPKRPIGSFVFLGPTGVGKTELARALAE
AMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTVLIMTSNVGAEALKRNKYVGFNIQDGEQDYKDMKGKVMDELKKAFRPEFLNRIDEIIVFHALERKHLN
EIVTLLSDQLIKRLKEQDISLELTEAAREKISQEGYDPEYGARPLRRAIQKHIEDRLSEELLKGTLLTGQLAIIDVDNGE
FIVRMAEKTSLVK
Nucleotide
Download Length: 2442 bp
>NTDB_id=360436 FAY30_RS00490 WP_149868081.1 99342..101783(+) (clpC) [Bacillus sp. S3]
ATGATGTTTGGACGTTTTACCGAAAGAGCACAAAAGGTTCTTGCTTTGGCACAAGAGGAAGCTATCCGCCTGGGACATAA
CAACATTGGGACAGAGCATATTTTGTTAGGGCTGGTTCGCGAAGGTGAAGGAATTGCGGCAAAAGCACTTTATGGACTTG
GTTTAGGTTCTGAAAAAATCCAAAAGGAAGTTGAAAATCTAATTGGCAAAGGACAAGAAACCTCTCAAACCATTCACTAT
ACTCCTAGAGCTAAAAAGGTTATTGAACTATCAATGGATGAGGCGCGAAAATTAGGTCATTCCTATGTCGGTACAGAGCA
TATTCTCCTTGGCTTAATCCGCGAGGGAGAAGGAGTGGCTGCAAGGGTCCTTAATAATCTTGGCGTCAGCTTAAATAAAG
CACGTCAGCAAGTACTGCAATTATTAGGAAGCAATGATTCAAGCGGTCATCAGGGTGGTGCGTCTGCTACTGCAAATACG
CCGACATTGGATAGTCTTGCAAGAGACTTAACGTCGATTGCCAGAGAAGGAAGCCTAGATCCTGTGATTGGACGCAGTAA
AGAAATTCAGCGTGTCATTGAGGTGCTGAGCCGTCGAACTAAAAATAATCCGGTATTAATCGGTGAACCTGGAGTCGGAA
AAACAGCGATTGCTGAAGGCCTCGCTCAACAAATTGTTAATAATGAAGTGCCGGAGATTCTTCGTGATAAACGTGTCATG
ACACTCGATATGGGCACTGTTGTTGCAGGAACAAAATATCGCGGTGAGTTCGAGGACCGCTTGAAGAAAGTAATGGATGA
AATTCGCCAGGCAGGAAATATCATTTTATTCATTGATGAACTCCATACCTTAATTGGCGCAGGCGGCGCGGAGGGTGCAA
TCGATGCCTCCAATATCTTAAAGCCATCGCTTGCCCGTGGTGAGCTTCAATGTATTGGGGCAACCACACTGGATGAATAT
CGTAAATACATTGAAAAAGATGCAGCGTTAGAACGACGCTTCCAGCCGATTCGCGTCGATGAACCAACGGCTGAAGAATC
AGTACAAATTTTAGAAGGATTGCGTGACCGTTATGAGGCACACCACCGTGTTTCTATTACGGATGAGGCGATCAAAGCAG
CTGTTAAGCTTTCAGACCGCTATATTTCAGACAGATTTCTGCCTGATAAAGCGATTGACCTAATCGATGAAGCAGGATCA
AAGGTACGGCTTCGCTCTTATACCACTCCTCCAAACTTAAAGGAATTAGAGGTAAAGCTTGAGGAGGTAAGAAAAGAAAA
GGATGCCGCTGTCCAAAGTCAAGAATTTGAAAAGGCAGCCTCCTTAAGGGATACGGAACAACGTCTTCGCGAGCAGCTTG
AAGAAACGAAGAAGACGTGGAAGGAAAAGCAAGGGAAAGAAAACAATGAGGTAACGGTTGAAGATATCGCAAGCGTGGTA
TCCAGCTGGACCGGAGTGCCTGTTTCTAAGCTTGCTGAAACGGAAACAGCGAAGTTACTTAATTTAGAAGAAGTGCTTCA
TTCTCGGATTATCGGTCAAGAGGAAGCAGTCAAAGCTGTTTCAAAGGCAGTCCGCCGTGCAAGAGCGGGATTAAAAGATC
CAAAACGTCCAATCGGTTCCTTTGTCTTCCTGGGACCAACCGGGGTCGGAAAAACAGAATTAGCCCGTGCCCTTGCTGAA
GCGATGTTTGGCGATGAAGATGCAATGATTCGGATCGATATGTCTGAGTATATGGAAAAGCATTCCACATCAAGACTTGT
TGGATCACCTCCAGGATATGTCGGCTATGAAGAAGGCGGACAATTAACGGAAAAGGTCCGGAGAAAACCTTACTCTGTCA
TACTGCTTGACGAAATTGAAAAGGCACATCCGGATGTATTTAATATTTTGCTCCAAGTACTTGAAGATGGCCGTTTAACG
GATTCTAAGGGAAGAACCGTAGATTTCCGGAACACGGTGTTGATTATGACGTCCAATGTCGGCGCAGAGGCACTGAAACG
AAACAAATATGTGGGCTTTAATATTCAAGATGGGGAACAGGATTACAAAGATATGAAGGGTAAAGTGATGGATGAATTAA
AGAAAGCCTTCCGTCCGGAGTTCTTGAATCGAATCGATGAAATTATTGTTTTCCATGCGTTAGAAAGAAAGCATTTAAAT
GAAATTGTCACATTGCTATCTGATCAGTTAATCAAACGCTTAAAAGAACAAGATATTTCACTGGAATTAACTGAAGCAGC
AAGGGAGAAAATTTCGCAGGAAGGGTACGACCCTGAATACGGGGCAAGGCCGCTTAGACGGGCAATTCAAAAACATATTG
AAGACCGTCTCTCTGAGGAATTATTAAAAGGAACTCTATTAACTGGCCAACTTGCAATAATTGATGTAGATAATGGCGAA
TTTATTGTGAGAATGGCCGAAAAAACAAGCTTAGTAAAATAA
ATGATGTTTGGACGTTTTACCGAAAGAGCACAAAAGGTTCTTGCTTTGGCACAAGAGGAAGCTATCCGCCTGGGACATAA
CAACATTGGGACAGAGCATATTTTGTTAGGGCTGGTTCGCGAAGGTGAAGGAATTGCGGCAAAAGCACTTTATGGACTTG
GTTTAGGTTCTGAAAAAATCCAAAAGGAAGTTGAAAATCTAATTGGCAAAGGACAAGAAACCTCTCAAACCATTCACTAT
ACTCCTAGAGCTAAAAAGGTTATTGAACTATCAATGGATGAGGCGCGAAAATTAGGTCATTCCTATGTCGGTACAGAGCA
TATTCTCCTTGGCTTAATCCGCGAGGGAGAAGGAGTGGCTGCAAGGGTCCTTAATAATCTTGGCGTCAGCTTAAATAAAG
CACGTCAGCAAGTACTGCAATTATTAGGAAGCAATGATTCAAGCGGTCATCAGGGTGGTGCGTCTGCTACTGCAAATACG
CCGACATTGGATAGTCTTGCAAGAGACTTAACGTCGATTGCCAGAGAAGGAAGCCTAGATCCTGTGATTGGACGCAGTAA
AGAAATTCAGCGTGTCATTGAGGTGCTGAGCCGTCGAACTAAAAATAATCCGGTATTAATCGGTGAACCTGGAGTCGGAA
AAACAGCGATTGCTGAAGGCCTCGCTCAACAAATTGTTAATAATGAAGTGCCGGAGATTCTTCGTGATAAACGTGTCATG
ACACTCGATATGGGCACTGTTGTTGCAGGAACAAAATATCGCGGTGAGTTCGAGGACCGCTTGAAGAAAGTAATGGATGA
AATTCGCCAGGCAGGAAATATCATTTTATTCATTGATGAACTCCATACCTTAATTGGCGCAGGCGGCGCGGAGGGTGCAA
TCGATGCCTCCAATATCTTAAAGCCATCGCTTGCCCGTGGTGAGCTTCAATGTATTGGGGCAACCACACTGGATGAATAT
CGTAAATACATTGAAAAAGATGCAGCGTTAGAACGACGCTTCCAGCCGATTCGCGTCGATGAACCAACGGCTGAAGAATC
AGTACAAATTTTAGAAGGATTGCGTGACCGTTATGAGGCACACCACCGTGTTTCTATTACGGATGAGGCGATCAAAGCAG
CTGTTAAGCTTTCAGACCGCTATATTTCAGACAGATTTCTGCCTGATAAAGCGATTGACCTAATCGATGAAGCAGGATCA
AAGGTACGGCTTCGCTCTTATACCACTCCTCCAAACTTAAAGGAATTAGAGGTAAAGCTTGAGGAGGTAAGAAAAGAAAA
GGATGCCGCTGTCCAAAGTCAAGAATTTGAAAAGGCAGCCTCCTTAAGGGATACGGAACAACGTCTTCGCGAGCAGCTTG
AAGAAACGAAGAAGACGTGGAAGGAAAAGCAAGGGAAAGAAAACAATGAGGTAACGGTTGAAGATATCGCAAGCGTGGTA
TCCAGCTGGACCGGAGTGCCTGTTTCTAAGCTTGCTGAAACGGAAACAGCGAAGTTACTTAATTTAGAAGAAGTGCTTCA
TTCTCGGATTATCGGTCAAGAGGAAGCAGTCAAAGCTGTTTCAAAGGCAGTCCGCCGTGCAAGAGCGGGATTAAAAGATC
CAAAACGTCCAATCGGTTCCTTTGTCTTCCTGGGACCAACCGGGGTCGGAAAAACAGAATTAGCCCGTGCCCTTGCTGAA
GCGATGTTTGGCGATGAAGATGCAATGATTCGGATCGATATGTCTGAGTATATGGAAAAGCATTCCACATCAAGACTTGT
TGGATCACCTCCAGGATATGTCGGCTATGAAGAAGGCGGACAATTAACGGAAAAGGTCCGGAGAAAACCTTACTCTGTCA
TACTGCTTGACGAAATTGAAAAGGCACATCCGGATGTATTTAATATTTTGCTCCAAGTACTTGAAGATGGCCGTTTAACG
GATTCTAAGGGAAGAACCGTAGATTTCCGGAACACGGTGTTGATTATGACGTCCAATGTCGGCGCAGAGGCACTGAAACG
AAACAAATATGTGGGCTTTAATATTCAAGATGGGGAACAGGATTACAAAGATATGAAGGGTAAAGTGATGGATGAATTAA
AGAAAGCCTTCCGTCCGGAGTTCTTGAATCGAATCGATGAAATTATTGTTTTCCATGCGTTAGAAAGAAAGCATTTAAAT
GAAATTGTCACATTGCTATCTGATCAGTTAATCAAACGCTTAAAAGAACAAGATATTTCACTGGAATTAACTGAAGCAGC
AAGGGAGAAAATTTCGCAGGAAGGGTACGACCCTGAATACGGGGCAAGGCCGCTTAGACGGGCAATTCAAAAACATATTG
AAGACCGTCTCTCTGAGGAATTATTAAAAGGAACTCTATTAACTGGCCAACTTGCAATAATTGATGTAGATAATGGCGAA
TTTATTGTGAGAATGGCCGAAAAAACAAGCTTAGTAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
87.284 |
99.631 |
0.87 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.504 |
99.139 |
0.491 |
| clpC | Streptococcus thermophilus LMD-9 |
46.173 |
100 |
0.467 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.798 |
100 |
0.462 |
| clpC | Streptococcus mutans UA159 |
45.543 |
100 |
0.459 |
| clpC | Streptococcus pneumoniae D39 |
45.209 |
100 |
0.453 |
| clpC | Streptococcus pneumoniae Rx1 |
45.209 |
100 |
0.453 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.086 |
100 |
0.451 |
| clpE | Streptococcus mutans UA159 |
53.599 |
80.32 |
0.431 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
53.071 |
78.106 |
0.415 |
| clpE | Streptococcus pneumoniae TIGR4 |
54.18 |
76.507 |
0.415 |
| clpE | Streptococcus pneumoniae Rx1 |
53.933 |
76.63 |
0.413 |
| clpE | Streptococcus pneumoniae D39 |
53.933 |
76.63 |
0.413 |
| clpE | Streptococcus pneumoniae R6 |
53.933 |
76.63 |
0.413 |