Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   E4167_RS09685 Genome accession   NZ_CP039631
Coordinates   2166049..2166456 (+) Length   135 a.a.
NCBI ID   WP_010564379.1    Uniprot ID   A0A7Y8D5M8
Organism   Pseudomonas veronii strain Pvy     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2161049..2171456
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E4167_RS09660 (E4167_10195) pyrR 2162070..2162576 (-) 507 WP_017845001.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  E4167_RS09665 (E4167_10200) ruvX 2162657..2163097 (-) 441 WP_141123132.1 Holliday junction resolvase RuvX -
  E4167_RS09670 (E4167_10205) - 2163097..2163666 (-) 570 WP_163957476.1 YqgE/AlgH family protein -
  E4167_RS09675 (E4167_10210) - 2163866..2164774 (-) 909 Protein_1920 energy transducer TonB -
  E4167_RS09680 (E4167_10215) gshB 2164853..2165809 (-) 957 WP_155677596.1 glutathione synthase -
  E4167_RS09685 (E4167_10220) pilG 2166049..2166456 (+) 408 WP_010564379.1 twitching motility response regulator PilG Regulator
  E4167_RS09690 (E4167_10225) pilH 2166503..2166868 (+) 366 WP_046487806.1 twitching motility response regulator PilH -
  E4167_RS09695 (E4167_10230) - 2166881..2167405 (+) 525 WP_046381763.1 chemotaxis protein CheW -
  E4167_RS09700 (E4167_10235) - 2167402..2169453 (+) 2052 Protein_1925 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14906.40 Da        Isoelectric Point: 7.3842

>NTDB_id=360106 E4167_RS09685 WP_010564379.1 2166049..2166456(+) (pilG) [Pseudomonas veronii strain Pvy]
MEQHSNALRVMVIDDSKTIRRTAETLLKNVGCDVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLGAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=360106 E4167_RS09685 WP_010564379.1 2166049..2166456(+) (pilG) [Pseudomonas veronii strain Pvy]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGACGATTCGAAAACGATCCGCCGCACCGCCGAAACCCTGTT
GAAGAACGTGGGCTGCGATGTCATCACGGCCATCGATGGTTTCGATGCCCTGGCCCGGATTGTGGATCATCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACGTGCGCCCTGGTGAAGAACAACCCGGCGTTCAAG
TCGATCCCGGTGATCATGCTGTCTTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGTATCGTCGGTGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGGCGCGATCAAGGCCTACGTGCCGGGTTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7Y8D5M8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70.4

92.593

0.652
  vicR Streptococcus mutans UA159

38.889

93.333

0.363

Multiple sequence alignment