Detailed information NTG0359726

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: GTK64_RS19915
• Genome accession: NZ_CP047461
• Coordinates: 4144894..4146168 (+)
• Length: 424 a.a.
• NCBI ID: WP_164538557.1
• Uniprot ID: -
• Organism: Escherichia coli strain ZF34
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 4139894..4151168

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GTK64_RS19895 (GTK64_19840)	yajG	4141057..4141635 (-)	579	WP_001295326.1	lipoprotein	-
GTK64_RS19900 (GTK64_19845)	bolA	4141940..4142257 (+)	318	WP_000973448.1	transcriptional regulator BolA	-
GTK64_RS19905 (GTK64_19850)	tig	4142601..4143899 (+)	1299	WP_001198386.1	trigger factor	-
GTK64_RS19910 (GTK64_19855)	clpP	4144145..4144768 (+)	624	WP_000122253.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
GTK64_RS19915 (GTK64_19860)	clpX	4144894..4146168 (+)	1275	WP_164538557.1	ATP-dependent protease ATP-binding subunit ClpX	Regulator
GTK64_RS19920 (GTK64_19865)	lon	4146356..4148710 (+)	2355	WP_001295325.1	endopeptidase La	-
GTK64_RS19925 (GTK64_19870)	hupB	4148919..4149191 (+)	273	WP_001043542.1	nucleoid-associated protein HU-beta	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 46341.98 Da
• Isoelectric Point: 4.9982

>NTDB_id=359726 GTK64_RS19915 WP_164538557.1 4144894..4146168(+) (clpX) [Escherichia coli strain ZF34]
MTDKRKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKEVAPHRERSALPTPHEIRNHLDDYVIG
QEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVEN
IIQKLLQKCDYDVQKAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGGRKHPQQEFLQVDT
SKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAKSDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEE
ALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDE
SVIDGQSKPLLIYGKPEAQQASGE

Nucleotide

• Length: 1275 bp

>NTDB_id=359726 GTK64_RS19915 WP_164538557.1 4144894..4146168(+) (clpX) [Escherichia coli strain ZF34]
ATGACAGATAAACGCAAAGATGGCTCAGGCAAATTGCTGTATTGCTCTTTTTGCGGCAAAAGCCAGCATGAAGTGCGCAA
GCTGATTGCCGGTCCATCCGTGTATATCTGCGACGAATGTGTTGATTTATGTAACGACATCATTCGCGAAGAGATTAAAG
AAGTTGCACCGCATCGTGAACGCAGTGCGCTACCGACGCCGCATGAAATTCGCAACCACCTGGACGATTACGTTATCGGC
CAGGAACAGGCGAAAAAAGTGCTGGCGGTCGCGGTATACAACCATTACAAACGTCTGCGCAACGGCGATACCAGCAATGG
TGTCGAGTTGGGCAAAAGTAACATTCTGCTGATCGGTCCGACCGGTTCCGGTAAAACGCTGCTGGCTGAAACGCTGGCGC
GCCTGCTGGACGTCCCGTTCACCATGGCCGACGCAACCACGCTGACCGAAGCCGGTTATGTGGGCGAAGACGTTGAAAAC
ATCATTCAGAAGCTGTTGCAAAAGTGCGATTACGACGTACAGAAAGCGCAGCGCGGGATTGTCTACATCGATGAAGTCGA
CAAGATTTCTCGTAAGTCAGACAACCCGTCTATTACCCGTGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAAC
TGATCGAAGGTACGGTAGCTGCTGTTCCACCGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACC
TCTAAGATCCTGTTTATCTGTGGCGGTGCGTTTGCCGGTCTGGATAAAGTGATTTCCCATCGTGTAGAAACCGGCTCCGG
CATTGGTTTTGGCGCGACGGTAAAAGCGAAGTCCGACAAAGCAAGCGAAGGCGAGCTGCTGGCGCAGGTTGAACCGGAAG
ATCTAATCAAGTTTGGTCTGATCCCTGAGTTCATTGGTCGTCTGCCGGTTGTCGCAACGTTGAATGAACTGAGCGAAGAA
GCTCTGATTCAGATCCTCAAAGAGCCGAAAAACGCCCTGACCAAGCAGTATCAGGCGCTGTTTAATCTGGAAGGCGTGGA
TCTGGAATTCCGTGACGAGGCGCTGGATGCTATCGCTAAGAAAGCGATGGCGCGTAAAACCGGTGCCCGTGGCCTGCGTT
CCATCGTAGAAGCCGCACTGCTCGATACCATGTACGATCTGCCGTCCATGGAAGATGTCGAAAAAGTGGTTATAGACGAG
TCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAA

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (13-50)

• AAA domain (Cdc48 subfamily) (AAA_2) (112-310)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (317-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	59.601	94.575	0.564
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	55.147	96.226	0.531