Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | EA714_RS10485 | Genome accession | NZ_CP039520 |
| Coordinates | 2189666..2190046 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain TG22627 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2184666..2195046
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EA714_RS10455 (EA714_010455) | tadA | 2184784..2185287 (-) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
| EA714_RS10460 (EA714_010460) | - | 2185294..2186418 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| EA714_RS10465 (EA714_010465) | ung | 2186415..2187128 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| EA714_RS10470 (EA714_010470) | - | 2187179..2187775 (-) | 597 | WP_000908452.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| EA714_RS10475 (EA714_010475) | gspK | 2188006..2188965 (-) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| EA714_RS10480 (EA714_010480) | xcpW | 2188965..2189666 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| EA714_RS10485 (EA714_010485) | xcpV | 2189666..2190046 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| EA714_RS10490 (EA714_010490) | - | 2190036..2190590 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| EA714_RS10495 (EA714_010495) | - | 2190600..2191208 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| EA714_RS10500 (EA714_010500) | - | 2191246..2192019 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| EA714_RS10505 (EA714_010505) | - | 2192037..2192378 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| EA714_RS10510 (EA714_010510) | - | 2192390..2193370 (-) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| EA714_RS10515 (EA714_010515) | kdsB | 2193382..2194143 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=359530 EA714_RS10485 WP_000836911.1 2189666..2190046(-) (xcpV) [Acinetobacter baumannii strain TG22627]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=359530 EA714_RS10485 WP_000836911.1 2189666..2190046(-) (xcpV) [Acinetobacter baumannii strain TG22627]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |