Detailed information NTG0359529

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: EA714_RS10480
• Genome accession: NZ_CP039520
• Coordinates: 2188965..2189666 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain TG22627
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2183965..2194666

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EA714_RS10450 (EA714_010450)	-	2184271..2184714 (-)	444	WP_001246675.1	SRPBCC family protein	-
EA714_RS10455 (EA714_010455)	tadA	2184784..2185287 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
EA714_RS10460 (EA714_010460)	-	2185294..2186418 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
EA714_RS10465 (EA714_010465)	ung	2186415..2187128 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
EA714_RS10470 (EA714_010470)	-	2187179..2187775 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
EA714_RS10475 (EA714_010475)	gspK	2188006..2188965 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
EA714_RS10480 (EA714_010480)	xcpW	2188965..2189666 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
EA714_RS10485 (EA714_010485)	xcpV	2189666..2190046 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
EA714_RS10490 (EA714_010490)	-	2190036..2190590 (-)	555	WP_000841373.1	type II secretion system protein	-
EA714_RS10495 (EA714_010495)	-	2190600..2191208 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
EA714_RS10500 (EA714_010500)	-	2191246..2192019 (-)	774	WP_000497298.1	TatD family hydrolase	-
EA714_RS10505 (EA714_010505)	-	2192037..2192378 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
EA714_RS10510 (EA714_010510)	-	2192390..2193370 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
EA714_RS10515 (EA714_010515)	kdsB	2193382..2194143 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=359529 EA714_RS10480 WP_000594589.1 2188965..2189666(-) (xcpW) [Acinetobacter baumannii strain TG22627]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=359529 EA714_RS10480 WP_000594589.1 2188965..2189666(-) (xcpW) [Acinetobacter baumannii strain TG22627]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996