Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   GSY53_RS02920 Genome accession   NZ_CP047325
Coordinates   554665..555525 (-) Length   286 a.a.
NCBI ID   WP_032677058.1    Uniprot ID   C0JBN8
Organism   Bacillus subtilis strain GOT9     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 549665..560525
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GSY53_RS02885 (GSY53_02885) mrpE 549903..550379 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  GSY53_RS02890 (GSY53_02890) mrpF 550379..550663 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  GSY53_RS02895 (GSY53_02895) mnhG 550647..551021 (+) 375 WP_003228812.1 monovalent cation/H(+) antiporter subunit G -
  GSY53_RS02900 (GSY53_02900) yuxO 551060..551440 (-) 381 WP_003228810.1 hotdog fold thioesterase -
  GSY53_RS02905 (GSY53_02905) comA 551459..552103 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  GSY53_RS02910 (GSY53_02910) comP 552184..554481 (-) 2298 WP_033884760.1 histidine kinase Regulator
  GSY53_RS02915 (GSY53_02915) comX 554489..554650 (-) 162 WP_003228803.1 competence pheromone ComX -
  GSY53_RS02920 (GSY53_02920) comQ 554665..555525 (-) 861 WP_032677058.1 polyprenyl synthetase family protein Regulator
  GSY53_RS02925 (GSY53_02925) degQ 555710..555850 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  GSY53_RS02930 (GSY53_02930) - 556072..556197 (+) 126 WP_003228793.1 hypothetical protein -
  GSY53_RS02935 (GSY53_02935) - 556311..556679 (+) 369 WP_014477834.1 hypothetical protein -
  GSY53_RS02940 (GSY53_02940) pdeH 556655..557884 (-) 1230 WP_003228790.1 cyclic di-GMP phosphodiesterase -
  GSY53_RS02945 (GSY53_02945) pncB 558021..559493 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  GSY53_RS02950 (GSY53_02950) pncA 559509..560060 (-) 552 WP_014477836.1 isochorismatase family cysteine hydrolase -

Sequence

Protein


Download         Length: 286 a.a.        Molecular weight: 32483.40 Da        Isoelectric Point: 4.6790

>NTDB_id=359272 GSY53_RS02920 WP_032677058.1 554665..555525(-) (comQ) [Bacillus subtilis strain GOT9]
MKEIVSQKIMNQDLERYLQNFIESKDTFEFADLALHHYLAFNGQDQKAIELLAAGIELLILSFDIYDDLEDQDNGSAVWM
KIDSSIALNAVTALYTLSIQVMCQASHEPEFSQEILNFALQSIQGQHDDIVNAPQTEEACLEMIKNKSGALTALPCVMGV
MLATGKYHPIVASYSYELGIISQIDNDYKGLFYLNNDFVQKKNTLAYLYLKKQFNDASAELLSLYQKPEEFVSINTKALK
RKLTEAGVIQYLLVMKHLSLQKIKNEMSQLKLEEDKTEKLLSVMIK

Nucleotide


Download         Length: 861 bp        

>NTDB_id=359272 GSY53_RS02920 WP_032677058.1 554665..555525(-) (comQ) [Bacillus subtilis strain GOT9]
ATGAAGGAGATTGTAAGCCAAAAAATAATGAATCAGGACTTGGAACGATATCTTCAGAATTTTATTGAGTCTAAGGATAC
GTTTGAGTTTGCCGATTTGGCTCTTCATCATTATTTAGCTTTTAACGGTCAGGACCAAAAAGCAATCGAATTGCTAGCTG
CCGGAATTGAATTGCTTATACTCTCATTCGATATTTATGATGACTTAGAGGATCAAGATAATGGAAGTGCTGTCTGGATG
AAGATTGACTCGTCAATCGCTTTAAATGCAGTTACAGCTCTTTACACCCTAAGTATACAAGTGATGTGTCAAGCTAGTCA
TGAACCAGAATTTTCACAAGAGATATTGAATTTTGCGTTACAATCAATTCAAGGCCAGCATGATGATATTGTGAATGCGC
CGCAAACTGAAGAAGCCTGTCTTGAAATGATCAAAAATAAATCAGGAGCGCTAACGGCATTGCCTTGTGTAATGGGAGTA
ATGTTGGCAACAGGCAAATATCATCCCATCGTGGCTTCTTATTCTTATGAACTTGGGATTATTTCACAGATCGATAATGA
TTATAAAGGTTTGTTTTACTTAAATAACGATTTTGTTCAGAAAAAAAATACATTGGCATACTTATACTTAAAGAAACAAT
TTAACGATGCTTCAGCGGAGCTACTAAGTTTATATCAAAAACCAGAGGAATTTGTTTCTATTAATACTAAGGCTTTGAAG
CGAAAATTGACAGAAGCAGGCGTTATACAATATTTACTGGTGATGAAACATTTATCTCTCCAAAAAATAAAAAATGAAAT
GTCACAATTAAAACTAGAAGAAGATAAAACTGAAAAATTATTGTCTGTTATGATTAAATAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(39-229)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0JBN8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

44.84

98.252

0.441