Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   GSF72_RS08025 Genome accession   NZ_CP047321
Coordinates   1593871..1595157 (-) Length   428 a.a.
NCBI ID   WP_000121116.1    Uniprot ID   Q5HGG9
Organism   Staphylococcus aureus strain RJ1267     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1588871..1600157
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GSF72_RS08020 (GSF72_08020) - 1592148..1593851 (-) 1704 WP_048665390.1 proline--tRNA ligase -
  GSF72_RS08025 (GSF72_08025) eeP 1593871..1595157 (-) 1287 WP_000121116.1 RIP metalloprotease RseP Regulator
  GSF72_RS08030 (GSF72_08030) - 1595394..1596176 (-) 783 WP_000868413.1 phosphatidate cytidylyltransferase -
  GSF72_RS08035 (GSF72_08035) - 1596183..1596953 (-) 771 WP_000473705.1 isoprenyl transferase -
  GSF72_RS08040 (GSF72_08040) frr 1597326..1597880 (-) 555 WP_001280006.1 ribosome recycling factor -
  GSF72_RS08045 (GSF72_08045) pyrH 1597899..1598621 (-) 723 WP_000057330.1 UMP kinase -
  GSF72_RS08050 (GSF72_08050) tsf 1598758..1599639 (-) 882 WP_000201387.1 translation elongation factor Ts -
  GSF72_RS08055 (GSF72_08055) - 1599674..1599787 (-) 114 WP_001789890.1 hypothetical protein -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 48106.51 Da        Isoelectric Point: 9.5354

>NTDB_id=359216 GSF72_RS08025 WP_000121116.1 1593871..1595157(-) (eeP) [Staphylococcus aureus strain RJ1267]
MSYLVTIIAFIIVFGVLVTVHEYGHMFFAKRAGIMCPEFAIGMGPKIFSFRKNETLYTIRLLPVGGYVRMAGDGLEEPPV
EPGMNVKIKLNEENEITHIILDDHHKFQQIEAIEVKKCDFKDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRD
RQFAHKKPWPKFLTLFAGPLFNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGLQKGDKIVQIGKYKISEFDDVDK
ALDKVKDNKTTVKFERDGKTKSVELTPKKTEKKLTKVSSETKYVLGFQPASEHTLFKPIVFGFKSFLIGSTYIFTAVVGM
LASIFTGGFSFDMLNGPVGIYHNVDSVVKAGIISLIGYTALLSVNLGIMNLIPIPALDGGRILFVIYEAIFRKPVNKKAE
TTIIAIGAIFMVVIMILVTWNDIRRYFL

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=359216 GSF72_RS08025 WP_000121116.1 1593871..1595157(-) (eeP) [Staphylococcus aureus strain RJ1267]
GTGAGCTATTTAGTTACAATAATTGCATTTATTATTGTTTTTGGTGTACTAGTAACTGTTCATGAATATGGCCATATGTT
TTTTGCGAAAAGAGCAGGCATTATGTGTCCAGAATTTGCGATCGGTATGGGGCCAAAAATTTTTAGTTTTAGAAAAAATG
AAACACTTTACACTATTAGGTTATTGCCTGTTGGTGGATATGTTCGTATGGCAGGAGATGGCTTAGAAGAGCCACCAGTC
GAGCCCGGTATGAACGTTAAAATTAAACTTAATGAAGAAAATGAAATAACACATATCATATTAGATGATCATCATAAGTT
TCAACAAATTGAAGCGATCGAAGTTAAAAAATGTGATTTTAAGGATGACTTATTCATAGAAGGTATCACTGCTTATGATA
ATGAAAGACATCATTTTAAAATTGCTAGAAAGTCTTTCTTTGTTGAAAATGGTAGCTTAGTTCAAATTGCTCCGAGAGAC
AGACAATTTGCACATAAAAAGCCATGGCCGAAATTTTTAACATTATTTGCGGGACCGTTATTTAACTTTATATTAGCTTT
AGTCCTATTTATTGGTCTTGCATATTATCAAGGCACGCCTACGTCTACTGTAGAACAAGTCGCAGATAAGTATCCAGCTC
AACAAGCAGGATTACAAAAAGGTGATAAGATCGTCCAAATTGGCAAATATAAAATATCTGAATTTGATGATGTTGATAAG
GCGTTAGATAAAGTTAAAGATAATAAGACGACTGTTAAATTTGAACGTGATGGTAAAACAAAGTCAGTTGAATTAACACC
TAAAAAGACTGAAAAAAAACTGACTAAAGTAAGTTCAGAGACGAAGTATGTTCTCGGATTCCAACCAGCGAGTGAACATA
CACTTTTTAAACCAATTGTATTCGGATTTAAAAGCTTTTTAATCGGTAGTACTTATATTTTTACAGCTGTAGTAGGTATG
TTGGCTAGTATATTTACGGGCGGATTCTCATTTGATATGTTAAATGGTCCGGTTGGTATTTATCATAACGTCGACTCAGT
TGTTAAAGCGGGTATCATTAGCTTAATTGGTTACACTGCGTTATTAAGTGTAAACTTAGGTATTATGAATTTAATTCCTA
TTCCTGCACTAGACGGTGGTCGTATTTTATTTGTTATATATGAAGCGATTTTCAGAAAACCAGTTAATAAAAAAGCGGAA
ACAACGATTATTGCTATTGGTGCCATTTTCATGGTCGTTATAATGATATTAGTAACGTGGAATGATATTCGACGATATTT
CTTATAA

Domains


Predicted by InterProScan.

(191-265)

(9-413)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q5HGG9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.675

100

0.4

  eeP Streptococcus thermophilus LMG 18311

39.12

100

0.395