Detailed information
Bioinformatically predicted
Overview
| Name | rcrR | Type | Regulator |
| Locus tag | E8M05_RS06610 | Genome accession | NZ_CP039457 |
| Coordinates | 1249475..1249915 (-) | Length | 146 a.a. |
| NCBI ID | WP_061100410.1 | Uniprot ID | A0AAW6YA73 |
| Organism | Streptococcus pasteurianus strain WUSP067 | ||
| Function | regulate competence (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1241889..1265449 | 1249475..1249915 | within | 0 |
Gene organization within MGE regions
Location: 1241889..1265449
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E8M05_RS06575 (E8M05_06565) | - | 1241889..1242647 (-) | 759 | WP_172473475.1 | ABC transporter ATP-binding protein | - |
| E8M05_RS06580 (E8M05_06570) | - | 1242675..1243595 (-) | 921 | WP_013851962.1 | glycine betaine ABC transporter substrate-binding protein | - |
| E8M05_RS06585 (E8M05_06575) | - | 1243585..1244220 (-) | 636 | WP_013851963.1 | ABC transporter permease | - |
| E8M05_RS06590 (E8M05_06580) | - | 1244210..1244662 (-) | 453 | WP_003065246.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| E8M05_RS06595 (E8M05_06585) | - | 1244652..1245629 (-) | 978 | WP_117479603.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| E8M05_RS06600 (E8M05_06590) | rcrQ | 1245895..1247667 (-) | 1773 | WP_058692202.1 | ABC transporter ATP-binding protein | Regulator |
| E8M05_RS06605 (E8M05_06595) | rcrP | 1247657..1249471 (-) | 1815 | WP_003065252.1 | ABC transporter ATP-binding protein | Regulator |
| E8M05_RS06610 (E8M05_06600) | rcrR | 1249475..1249915 (-) | 441 | WP_061100410.1 | MarR family winged helix-turn-helix transcriptional regulator | Regulator |
| E8M05_RS06615 (E8M05_06605) | - | 1250088..1250498 (-) | 411 | WP_136596451.1 | peptide deformylase | - |
| E8M05_RS06620 (E8M05_06610) | - | 1250495..1251004 (-) | 510 | WP_117479609.1 | GNAT family N-acetyltransferase | - |
| E8M05_RS06625 (E8M05_06615) | gdhA | 1251281..1252630 (-) | 1350 | WP_003065263.1 | NADP-specific glutamate dehydrogenase | - |
| E8M05_RS06630 (E8M05_06620) | - | 1252876..1253373 (+) | 498 | WP_003065265.1 | DUF308 domain-containing protein | - |
| E8M05_RS11295 | queF | 1253429..1253920 (-) | 492 | WP_003065267.1 | preQ(1) synthase | - |
| E8M05_RS11300 | queE | 1253933..1254646 (-) | 714 | WP_003065269.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| E8M05_RS06640 (E8M05_06630) | queD | 1254639..1255085 (-) | 447 | WP_003065271.1 | 6-carboxytetrahydropterin synthase QueD | - |
| E8M05_RS06645 (E8M05_06635) | queC | 1255085..1255738 (-) | 654 | WP_013851967.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| E8M05_RS06650 (E8M05_06640) | - | 1255989..1257758 (-) | 1770 | WP_003065275.1 | ABC transporter ATP-binding protein | - |
| E8M05_RS06655 (E8M05_06645) | - | 1257761..1259500 (-) | 1740 | WP_136596452.1 | ABC transporter ATP-binding protein | - |
| E8M05_RS06660 (E8M05_06650) | - | 1259579..1261450 (-) | 1872 | WP_003065278.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| E8M05_RS06665 (E8M05_06655) | - | 1261447..1262652 (-) | 1206 | WP_003065280.1 | CCA tRNA nucleotidyltransferase | - |
| E8M05_RS06670 (E8M05_06660) | dapB | 1262649..1263416 (-) | 768 | WP_003065282.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| E8M05_RS06675 (E8M05_06665) | - | 1263436..1264284 (-) | 849 | WP_003065283.1 | DegV family protein | - |
| E8M05_RS06680 (E8M05_06670) | - | 1264284..1264664 (-) | 381 | WP_003065285.1 | DUF1149 family protein | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 17085.55 Da Isoelectric Point: 9.3733
>NTDB_id=358797 E8M05_RS06610 WP_061100410.1 1249475..1249915(-) (rcrR) [Streptococcus pasteurianus strain WUSP067]
MHKKDPFSQFRDFINLAENRVHALAESHGVENLAGPQGFAVLYLHDNPDKEIYIKDIEKRLRISKSVTSNLIKRMEKNGF
IRVISSIEDKRYKQVVLTELGKSKAQNIQDFHDEMHRQILAGVDHEDLKISFRVFDRILKNLENKE
MHKKDPFSQFRDFINLAENRVHALAESHGVENLAGPQGFAVLYLHDNPDKEIYIKDIEKRLRISKSVTSNLIKRMEKNGF
IRVISSIEDKRYKQVVLTELGKSKAQNIQDFHDEMHRQILAGVDHEDLKISFRVFDRILKNLENKE
Nucleotide
Download Length: 441 bp
>NTDB_id=358797 E8M05_RS06610 WP_061100410.1 1249475..1249915(-) (rcrR) [Streptococcus pasteurianus strain WUSP067]
ATGCATAAGAAAGATCCGTTTTCACAGTTTAGGGATTTTATCAATTTAGCGGAAAATCGTGTCCATGCTCTTGCGGAAAG
TCATGGTGTTGAAAATCTGGCTGGTCCACAGGGATTTGCAGTGTTGTATCTCCATGATAATCCTGATAAAGAAATTTATA
TCAAGGATATTGAGAAGAGACTAAGAATTTCAAAGTCAGTAACTAGTAATTTGATTAAGCGCATGGAGAAAAATGGTTTT
ATCCGAGTTATTTCGTCAATAGAAGATAAGCGTTATAAGCAAGTGGTGTTGACTGAACTTGGAAAATCAAAGGCTCAAAA
CATTCAAGATTTCCATGATGAAATGCATAGACAAATCTTAGCTGGTGTTGACCATGAGGATCTCAAAATTTCGTTTCGCG
TCTTTGACCGCATTTTGAAAAATTTAGAAAACAAGGAGTAA
ATGCATAAGAAAGATCCGTTTTCACAGTTTAGGGATTTTATCAATTTAGCGGAAAATCGTGTCCATGCTCTTGCGGAAAG
TCATGGTGTTGAAAATCTGGCTGGTCCACAGGGATTTGCAGTGTTGTATCTCCATGATAATCCTGATAAAGAAATTTATA
TCAAGGATATTGAGAAGAGACTAAGAATTTCAAAGTCAGTAACTAGTAATTTGATTAAGCGCATGGAGAAAAATGGTTTT
ATCCGAGTTATTTCGTCAATAGAAGATAAGCGTTATAAGCAAGTGGTGTTGACTGAACTTGGAAAATCAAAGGCTCAAAA
CATTCAAGATTTCCATGATGAAATGCATAGACAAATCTTAGCTGGTGTTGACCATGAGGATCTCAAAATTTCGTTTCGCG
TCTTTGACCGCATTTTGAAAAATTTAGAAAACAAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rcrR | Streptococcus mutans UA159 |
56.643 |
97.945 |
0.555 |