Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   E7T04_RS03860 Genome accession   NZ_CP039434
Coordinates   744157..745830 (+) Length   557 a.a.
NCBI ID   WP_002397924.1    Uniprot ID   A0A449FZN5
Organism   Enterococcus faecalis strain SGAir0397     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 739157..750830
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E7T04_RS03830 (E7T04_03830) - 739832..740062 (+) 231 WP_002355878.1 exodeoxyribonuclease VII small subunit -
  E7T04_RS03835 (E7T04_03835) - 740062..740943 (+) 882 WP_010828662.1 polyprenyl synthetase family protein -
  E7T04_RS03840 (E7T04_03840) - 740957..741772 (+) 816 WP_002364633.1 TlyA family rRNA (cytidine-2'-O)-methyltransferase -
  E7T04_RS03845 (E7T04_03845) - 742136..742693 (+) 558 WP_071646615.1 matrixin family metalloprotease -
  E7T04_RS03850 (E7T04_03850) - 742698..743558 (+) 861 WP_010706683.1 hypothetical protein -
  E7T04_RS03855 (E7T04_03855) - 743690..744139 (+) 450 WP_002355883.1 arginine repressor -
  E7T04_RS03860 (E7T04_03860) recN 744157..745830 (+) 1674 WP_002397924.1 DNA repair protein RecN Machinery gene
  E7T04_RS13645 - 745921..746031 (-) 111 WP_002383399.1 DUF4044 domain-containing protein -
  E7T04_RS03870 (E7T04_03870) - 746099..747064 (-) 966 WP_002383400.1 magnesium transporter CorA family protein -
  E7T04_RS03875 (E7T04_03875) - 747309..747701 (+) 393 WP_002383401.1 DUF3397 domain-containing protein -
  E7T04_RS03885 (E7T04_03885) mraZ 747935..748420 (+) 486 WP_002383402.1 division/cell wall cluster transcriptional repressor MraZ -
  E7T04_RS03890 (E7T04_03890) rsmH 748435..749391 (+) 957 WP_010774092.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  E7T04_RS03895 (E7T04_03895) ftsL 749408..749815 (+) 408 WP_002358883.1 cell division protein FtsL -

Sequence

Protein


Download         Length: 557 a.a.        Molecular weight: 62631.00 Da        Isoelectric Point: 4.5521

>NTDB_id=358487 E7T04_RS03860 WP_002397924.1 744157..745830(+) (recN) [Enterococcus faecalis strain SGAir0397]
MLQELSVKNFAIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGGRGSSDYIRQGANKCTLEGLFSMPKSQELKQLL
EELGIETEEDSLVIQRDISASGKNVCRVNGRIVNITNLKRIGEYLVDIHGQNEHQELMQSERHIDMLDEFGGKKLLAVKE
KYTQAYQEYRALEAKVRKRQKNEKEFAQRMDMLHFQSDEIASAQLVAGEEEQLLEERNKLNNFQKIADALTISYAALNGE
DDSSLDKIGTSMNELASIESLDSEYKTLSDTVQNAYYLLQEASGDLSRLIDGLELDEGRLNEVENRLELIRQMKRKYGDS
IETILSYYEEITKELAEADFLEGGTGDLEALLAEKQQAAHQQALALRKERKRLAKELEQQILTELKELYLERTEFEVRFT
ELEHLQENGLDGVEFYITTNPGEPLKPLVRVASGGELSRVMLAMKTIFSQTQGITSIVFDEVDTGVSGRVAQAIADKIYQ
ISENSQVLCITHLPQVAAVADEHYFIEKEIVAGRTETSVRILSEKERVNEIARMLAGSEITKLTIEHAQELLAMAKK

Nucleotide


Download         Length: 1674 bp        

>NTDB_id=358487 E7T04_RS03860 WP_002397924.1 744157..745830(+) (recN) [Enterococcus faecalis strain SGAir0397]
ATGTTACAAGAACTTTCCGTGAAAAATTTTGCGATTATCTCTTCGTTACAATTAGAGTTTCAAATGGGTATGACCGTTTT
AACGGGAGAAACGGGTGCGGGGAAATCCATCATTATTGATGCAATGGGATTACTCACAGGCGGACGCGGCTCCAGTGACT
ATATTCGTCAAGGAGCAAATAAATGCACCTTAGAAGGACTTTTTTCAATGCCGAAAAGTCAAGAATTAAAGCAATTATTA
GAAGAATTAGGTATTGAAACAGAAGAAGATTCTTTAGTGATTCAACGAGATATTTCCGCTTCTGGTAAAAATGTTTGCCG
TGTCAACGGACGAATTGTCAACATTACTAATTTAAAAAGAATTGGGGAATATTTAGTAGATATTCATGGCCAAAACGAAC
ATCAAGAATTGATGCAAAGTGAACGCCATATTGATATGTTGGATGAATTTGGTGGGAAAAAACTTTTAGCAGTCAAAGAA
AAATATACACAGGCGTATCAAGAGTATCGCGCACTCGAAGCCAAAGTCAGAAAGCGACAAAAAAATGAAAAAGAGTTTGC
CCAAAGAATGGACATGCTTCATTTTCAAAGTGATGAAATTGCTAGTGCACAGTTAGTGGCTGGCGAAGAAGAACAATTGC
TAGAAGAACGCAATAAACTGAACAATTTTCAAAAGATTGCTGATGCACTGACGATTAGTTATGCCGCGCTAAATGGTGAA
GACGATAGTAGTTTGGATAAAATCGGAACAAGTATGAATGAACTCGCTTCGATTGAATCCCTTGATTCAGAATATAAAAC
ATTGTCAGATACTGTTCAAAATGCTTACTACTTACTACAAGAAGCCAGTGGAGATCTTTCTAGGTTGATTGATGGCTTAG
AACTAGACGAAGGCCGCTTGAATGAAGTAGAAAATCGTTTGGAATTAATCCGTCAAATGAAACGTAAATATGGCGATTCA
ATCGAAACGATTTTATCTTACTATGAAGAAATCACCAAAGAGTTAGCAGAGGCTGATTTTTTGGAAGGTGGTACAGGTGA
CTTAGAAGCGTTGCTTGCAGAGAAACAACAAGCCGCTCATCAACAAGCATTAGCTTTACGAAAAGAACGAAAGCGCCTAG
CCAAAGAGCTCGAACAACAAATTTTAACCGAATTAAAAGAACTATATTTGGAGCGAACGGAATTTGAAGTCCGTTTTACA
GAACTTGAGCATTTACAAGAAAATGGCTTAGACGGAGTAGAATTTTATATTACTACTAACCCAGGGGAACCATTAAAACC
GTTAGTTCGGGTGGCTTCTGGCGGAGAACTTTCGCGAGTGATGCTAGCTATGAAAACAATCTTTTCTCAAACGCAAGGGA
TCACTAGTATTGTTTTTGATGAAGTGGATACAGGAGTTAGTGGCCGAGTAGCACAGGCGATTGCCGATAAAATTTATCAA
ATTTCAGAAAATTCGCAGGTGTTGTGTATCACGCACTTGCCACAAGTGGCGGCCGTTGCCGATGAACATTATTTTATTGA
AAAAGAAATCGTGGCGGGTCGGACAGAAACAAGCGTCCGAATTTTATCTGAAAAAGAGCGAGTAAACGAAATTGCGCGTA
TGCTCGCAGGAAGTGAAATTACGAAATTAACCATTGAACATGCACAAGAGCTGTTGGCGATGGCGAAAAAATAG

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A449FZN5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

48.691

100

0.501

Multiple sequence alignment