Detailed information NTG0358481

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: GRI05_RS05080
• Genome accession: NZ_CP047248
• Coordinates: 1027463..1028533 (-)
• Length: 356 a.a.
• NCBI ID: WP_043029021.1
• Uniprot ID: -
• Organism: Streptococcus suis strain LSM178
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1022463..1033533

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GRI05_RS05055 (GRI05_05180)	relB	1023675..1023926 (+)	252	WP_012775104.1	type II toxin-antitoxin system RelB family antitoxin	-
GRI05_RS05060 (GRI05_05185)	-	1023910..1024167 (+)	258	WP_011922404.1	type II toxin-antitoxin system RelE family toxin	-
GRI05_RS05065 (GRI05_05190)	braR	1024206..1024871 (+)	666	WP_012775103.1	response regulator transcription factor	Regulator
GRI05_RS05070 (GRI05_05195)	-	1024868..1025809 (+)	942	WP_012775102.1	sensor histidine kinase	-
GRI05_RS05075 (GRI05_05200)	-	1025885..1027393 (+)	1509	WP_011922400.1	phosphomannomutase/phosphoglucomutase	-
GRI05_RS05080 (GRI05_05205)	xerS	1027463..1028533 (-)	1071	WP_043029021.1	tyrosine recombinase XerS	Machinery gene
GRI05_RS05085 (GRI05_05210)	-	1028892..1029506 (-)	615	Protein_958	Abi family protein	-
GRI05_RS10545 (GRI05_05215)	-	1029565..1029855 (-)	291	WP_238714605.1	Abi family protein	-
GRI05_RS05090 (GRI05_05220)	-	1030506..1030943 (-)	438	WP_011922397.1	AAA family ATPase	-
GRI05_RS05095 (GRI05_05225)	-	1031008..1031748 (-)	741	WP_011922396.1	DUF3307 domain-containing protein	-
GRI05_RS05100 (GRI05_05230)	-	1031752..1032420 (-)	669	WP_011922395.1	SatD family protein	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41443.58 Da
• Isoelectric Point: 9.2257

>NTDB_id=358481 GRI05_RS05080 WP_043029021.1 1027463..1028533(-) (xerS) [Streptococcus suis strain LSM178]
MRRELLLEKIDQLKEIMPWFVLEYYQSKLAVPYSFTTLYEYLKEYRRFFEWLQDSDLVAVERIADIPLDVLEHLTKKDME
AFILYLRERPLLNANTTQNGVSQTTINRTLSALSSLFKYLTEEVENEQGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
LFLGDETMEFLDYVDKEYQVNLSKRALSSFQKNKERDLAILALLLASGVRLSEAGNLDLRDVNLNMMIIEVTRKGGKRDS
VNVAGFAKPYLEAYMGIRQQRYKAEKTDTAFFLSEYRGLPNRIDASSIEKMVAKYSADFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHANTQVTDLYTHIVNDEQKNALDQL

Nucleotide

• Length: 1071 bp

>NTDB_id=358481 GRI05_RS05080 WP_043029021.1 1027463..1028533(-) (xerS) [Streptococcus suis strain LSM178]
ATGAGACGCGAGTTATTATTGGAAAAAATTGATCAACTAAAAGAAATTATGCCTTGGTTTGTTCTGGAATATTATCAGTC
AAAATTGGCTGTGCCTTACAGTTTTACTACCTTATATGAATACTTGAAAGAATACCGTCGTTTTTTTGAATGGTTACAGG
ATTCGGATTTGGTGGCTGTTGAACGGATTGCTGACATTCCGCTGGATGTTCTGGAACATCTGACAAAAAAAGATATGGAA
GCTTTCATTCTTTATCTGCGGGAGCGTCCCTTGCTGAACGCCAATACCACGCAGAATGGTGTGTCGCAGACCACCATTAA
CCGTACCCTCTCGGCCCTTTCTAGTCTCTTCAAGTATTTAACCGAAGAAGTGGAGAATGAGCAGGGCGAGCCCTACTTCT
ACCGCAATGTCATGAAAAAGGTATCTACTAAGAAGAAGAAGGAAACCTTGGCAGCGCGGGCGGAGAACATCAAGCAAAAG
CTCTTTTTGGGCGATGAAACGATGGAGTTCTTGGACTATGTGGACAAGGAATACCAAGTCAATCTCTCTAAACGTGCCCT
CTCCTCCTTCCAGAAAAATAAGGAGCGGGATTTGGCGATTCTGGCGCTTCTCTTGGCTTCTGGCGTCCGTCTGTCAGAAG
CGGGGAATTTGGATCTTCGAGATGTAAACCTCAATATGATGATTATCGAAGTAACTCGTAAGGGTGGTAAACGGGACTCG
GTCAATGTGGCTGGGTTTGCTAAGCCCTACTTAGAAGCCTACATGGGCATCCGTCAGCAACGCTACAAGGCTGAAAAAAC
GGATACAGCCTTCTTCCTGTCCGAATACCGTGGTCTGCCTAACCGTATCGATGCTTCTTCTATTGAAAAAATGGTTGCCA
AGTACTCTGCGGACTTCAAGATACGCGTAACCCCCCACAAACTCCGTCACACATTGGCAACTCGTCTCTACGACGCCACC
AAGTCGCAAGTTCTAGTCAGTCATCAGCTGGGCCATGCCAATACCCAGGTCACCGATCTCTACACCCATATCGTCAACGA
TGAACAGAAAAATGCTCTGGATCAGTTGTGA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (190-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	82.865	100	0.829