Detailed information NTG0358352

Bioinformatically predicted

Overview

• Name: recP/tkt
• Type: Machinery gene
• Locus tag: GRT08_RS09115
• Genome accession: NZ_CP047234
• Coordinates: 1850081..1852084 (+)
• Length: 667 a.a.
• NCBI ID: WP_007611727.1
• Uniprot ID: A7Z556
• Organism: Bacillus amyloliquefaciens strain FJ4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1845081..1857084

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GRT08_RS09075	-	1845505..1845654 (+)	150	WP_166706258.1	hypothetical protein	-
GRT08_RS09080 (GRT08_08955)	-	1845641..1846471 (+)	831	WP_003154011.1	prohibitin family protein	-
GRT08_RS09085 (GRT08_08960)	-	1846499..1846948 (-)	450	WP_198863735.1	YndM family protein	-
GRT08_RS09090 (GRT08_08965)	-	1847090..1847518 (+)	429	WP_071391780.1	hypothetical protein	-
GRT08_RS09095 (GRT08_08970)	dinR/lexA	1847858..1848478 (-)	621	WP_003154004.1	transcriptional repressor LexA	Regulator
GRT08_RS09100 (GRT08_08975)	yneA	1848635..1848946 (+)	312	WP_071391779.1	cell division suppressor protein YneA	-
GRT08_RS09105 (GRT08_08980)	-	1848962..1849612 (+)	651	WP_003153998.1	recombinase family protein	-
GRT08_RS09110 (GRT08_08985)	-	1849681..1849914 (+)	234	WP_003153997.1	DUF896 domain-containing protein	-
GRT08_RS09115 (GRT08_08990)	recP/tkt	1850081..1852084 (+)	2004	WP_007611727.1	transketolase	Machinery gene
GRT08_RS09120 (GRT08_08995)	sirA	1852236..1852682 (+)	447	WP_101563056.1	sporulation inhibitor of replication protein SirA	-
GRT08_RS09125 (GRT08_09000)	-	1852768..1852986 (+)	219	WP_003153994.1	YneF family protein	-
GRT08_RS09130 (GRT08_09005)	-	1853060..1853233 (-)	174	WP_012117647.1	aspartyl-phosphate phosphatase Spo0E family protein	-
GRT08_RS09135 (GRT08_09010)	-	1853435..1854142 (+)	708	WP_088056486.1	cytochrome c biogenesis protein CcdA	-
GRT08_RS09140 (GRT08_09015)	-	1854227..1854589 (+)	363	WP_071391776.1	response regulator	-
GRT08_RS09145 (GRT08_09020)	-	1854669..1855160 (+)	492	WP_088005392.1	CcdC family protein	-
GRT08_RS09150 (GRT08_09025)	-	1855188..1855616 (-)	429	WP_070081881.1	DUF2621 domain-containing protein	-
GRT08_RS09155 (GRT08_09030)	-	1855850..1856221 (-)	372	WP_003153985.1	Hsp20/alpha crystallin family protein	-
GRT08_RS09160 (GRT08_09035)	-	1856315..1856461 (-)	147	WP_003153984.1	small acid-soluble spore protein P	-
GRT08_RS09165 (GRT08_09040)	sspO	1856491..1856637 (-)	147	WP_003153982.1	acid-soluble spore protein SspO	-

Sequence

Protein

• Length: 667 a.a.
• Molecular weight: 72541.75 Da
• Isoelectric Point: 4.9029

>NTDB_id=358352 GRT08_RS09115 WP_007611727.1 1850081..1852084(+) (recP/tkt) [Bacillus amyloliquefaciens strain FJ4]
MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVNPQNPGWFNRDRFVLSAGHGSMLLYSMLHLSG
YDLSIEDLKQFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLM
EGISSEAASLAGHLELGRLIVLYDSNDISLDGDLDRSFSENVKQRFEAMNWEVLYVEDGNNIAELTAAIEKARQNDKKPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGLEESKLTKEAYAWTFEEDFYVPEEVYGHFNQAVKEAGSKKEQEWNELFAAYKE
KYPELAEQLSLGMKGELPKDWDQEVPVYEKGSSLASRASSGEVLNGIAKKIPFFVGGSADLAGSNKTTIKNGGDFTAKDY
AGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLASLMGLPVTYVFTHDSIAVGEDGPTHEPIEQLA
SLRALPNLSVIRPADGNETAAAWKVAVQSQDHPTALVLTRQNLPTIDQQAEEAYAGVEKGAYIVSKAQTESPAALLLATG
SEVGLAIEAQAKLAEENIHVSVVSMPSWDRFEKQSAEYKNSVLPPNVTKRLAIEMGSSFGWGKFTGLEGDVLAIDRFGAS
APGETIMKEYGFTAENVVDRVKKLLNK

Nucleotide

• Length: 2004 bp

>NTDB_id=358352 GRT08_RS09115 WP_007611727.1 1850081..1852084(+) (recP/tkt) [Bacillus amyloliquefaciens strain FJ4]
ATGGATACAATTGAAAAGAAATCAGTTGCCACCATTCGTACACTATCTATAGACGCAATTGAAAAAGCGAATTCCGGACA
TCCGGGCATGCCGATGGGAGCCGCTCCGATGGCATACACGCTGTGGACGAAATTTATGAATGTAAATCCGCAGAATCCGG
GCTGGTTTAACCGCGACCGCTTTGTTTTATCAGCAGGCCACGGTTCAATGCTTTTATACAGCATGCTGCATTTAAGCGGA
TATGACCTCAGCATTGAAGACTTGAAACAGTTCCGTCAATGGGGAAGCAAAACACCGGGACATCCGGAGTTCGGGCATAC
AGCCGGAGTAGACGCAACGACCGGGCCGCTTGGACAGGGGATTGCAATGGCAGTGGGAATGGCAATTGCAGAACGCCATC
TGGCTGAGACATATAACCGTGATTCATTCAACGTAGTTGATCATTATACATACAGTATTTGCGGAGACGGCGATTTAATG
GAAGGCATTTCTTCCGAAGCCGCTTCTCTTGCAGGCCATCTTGAATTAGGCCGCCTGATCGTATTATACGATTCTAATGA
CATTTCCTTAGACGGCGATTTAGACCGCTCTTTCTCTGAAAATGTAAAGCAGCGTTTTGAAGCAATGAACTGGGAAGTTC
TTTATGTTGAGGACGGAAACAACATCGCTGAATTGACGGCTGCCATTGAAAAAGCGCGCCAGAATGATAAAAAACCGACT
TTGATTGAAGTGAAAACCACGATCGGTTTCGGTTCTCCAAACCGCGCGGGCACATCCGGCGTTCACGGCGCTCCGTTAGG
ACTAGAAGAGAGCAAGCTGACAAAAGAAGCGTATGCTTGGACGTTTGAAGAAGATTTTTATGTTCCGGAAGAAGTATACG
GGCATTTCAATCAAGCTGTAAAAGAAGCCGGCTCGAAAAAAGAACAGGAATGGAATGAACTGTTCGCGGCTTATAAAGAA
AAATATCCTGAGCTTGCTGAACAGCTGTCACTCGGCATGAAAGGCGAGCTTCCTAAAGACTGGGATCAGGAAGTTCCCGT
TTATGAAAAAGGCAGCAGCCTTGCTTCCCGCGCATCTTCAGGTGAGGTGCTGAACGGGATCGCCAAGAAAATTCCTTTCT
TTGTCGGGGGATCTGCTGACCTTGCGGGTTCAAATAAAACGACAATCAAAAATGGAGGAGACTTCACGGCCAAAGACTAT
GCCGGGAAAAACTTCTGGTTCGGTGTCCGTGAATTTGCGATGGGCGCTGCATTAAACGGAATGGCGCTTCACGGCGGCCT
CCGCGTATTCGGCGGCACATTCTTTGTATTCTCTGATTATTTAAGACCTGCCATTCGTCTGGCATCATTGATGGGACTCC
CTGTCACTTATGTATTCACGCATGACAGTATTGCCGTAGGGGAAGACGGGCCGACTCACGAACCGATTGAGCAGCTTGCT
TCTTTACGCGCACTTCCTAACCTTTCTGTGATCAGACCTGCTGACGGAAATGAAACCGCAGCTGCATGGAAGGTTGCCGT
TCAAAGCCAAGATCATCCGACAGCTCTTGTATTGACACGCCAAAACCTGCCGACGATTGATCAGCAGGCTGAAGAAGCGT
ATGCAGGCGTGGAAAAAGGGGCTTATATCGTTTCCAAAGCCCAAACGGAATCACCGGCCGCTCTTCTTTTAGCGACAGGT
TCTGAAGTCGGACTTGCGATCGAAGCTCAAGCGAAACTGGCTGAAGAAAACATTCACGTATCTGTAGTCAGCATGCCGAG
CTGGGACCGCTTTGAAAAACAATCGGCCGAGTACAAAAACAGCGTGCTTCCTCCGAATGTGACGAAACGTCTTGCGATCG
AAATGGGTTCAAGCTTCGGATGGGGCAAATTTACCGGTCTTGAAGGAGACGTTCTCGCAATTGACCGTTTCGGTGCTTCA
GCTCCGGGAGAAACAATTATGAAAGAATACGGGTTTACTGCAGAAAACGTGGTTGACCGCGTGAAAAAACTTCTAAACAA
ATAA

Domains

Predicted by InterProScan.

• Transketolase, thiamine diphosphate binding domain (Transketolase_N) (5-338)

• Transketolase, pyrimidine binding domain (Transket_pyr) (354-524)

• Transketolase, C-terminal domain (Transketolase_C) (549-657)

3D structure

• AlphaFold DB: A7Z556

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recP/tkt	Streptococcus pneumoniae TIGR4	56.061	98.951	0.555